RNA–Protein interactions for RNA: ENST00000550914.6

PTCH1-221, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-221ENST00000550914 OR3A1P47881 315 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 NPBWR2P48146 333 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 TMED1Q13445 227 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 KDM4DQ6B0I6 523 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 CCDC121Q6ZUS5 278 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 UTS2BQ765I0 119 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 TRAPPC6BQ86SZ2 158 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 STMN2Q93045 179 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 MYDGFQ969H8 173 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 RBM14Q96PK6 669 aaKnown RBP10.26□□□□□ -0.77
PTCH1-221ENST00000550914 IL4I1Q96RQ9 567 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 SLC25A33Q9BSK2 321 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 GPR61Q9BZJ8 451 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 RHOFQ9HBH0 211 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.26□□□□□ -0.77
PTCH1-221ENST00000550914 IL36RNQ9UBH0 155 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 HHLA2Q9UM44 414 aa10.26□□□□□ -0.77
PTCH1-221ENST00000550914 OOSP1A8MZH6 123 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 SH2D1BO14796 132 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 GYG2O15488 501 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 MITFO75030 526 aaPredicted RBP10.25□□□□□ -0.77
PTCH1-221ENST00000550914 INMTO95050 263 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 CSN2P05814 226 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 LPLP06858 475 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 PRKACAP17612 351 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 BCL3P20749 454 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 CDK2P24941 298 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 LMO1P25800 156 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 DUSP1P28562 367 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 MTCP1P56278 107 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 ISL1P61371 349 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 EGFEM1PQ0D2K5 195 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 ABCA11PQ4W5N1 156 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 CCDC144NLQ6NUI1 221 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 LHFPL2Q6ZUX7 228 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 PRSS35Q8N3Z0 413 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 SPSB1Q96BD6 273 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 TBX5Q99593 518 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 GABARAPL1Q9H0R8 117 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 HMG20AQ9NP66 347 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 PCDHGB5Q9Y5G0 923 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 STAB2Q8WWQ8 2551 aa10.25□□□□□ -0.77
PTCH1-221ENST00000550914 A0A087X0M5 115 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 IGKV1-9A0A0C4DH69 117 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 A0A1B0GX30 115 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 G3V2T6 193 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 H3BSH0 61 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 AMY1AP04745 511 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 AMY2AP04746 511 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 POU3F4P49335 361 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 PDZK1IP1Q13113 114 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 ATP6AP1Q15904 470 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 HLA-DRB5Q30154 266 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 PRAMEF5Q5TYX0 476 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 TMEM244Q5VVB8 128 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 FAM220AQ7Z4H9 259 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 CHST4Q8NCG5 386 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 OR10H4Q8NGA5 316 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 RFKQ969G6 155 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 ADAT3Q96EY9 351 aaPredicted RBP10.24□□□□□ -0.77
PTCH1-221ENST00000550914 COMMD4Q9H0A8 199 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 EXOSC4Q9NPD3 245 aaKnown RBP10.24□□□□□ -0.77
PTCH1-221ENST00000550914 INPP5EQ9NRR6 644 aa10.24□□□□□ -0.77
PTCH1-221ENST00000550914 DNAH9Q9NYC9 4486 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 ODAMA1E959 279 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 LY6LH3BQJ8 138 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 BUB1B-PAK6H3BSN5 160 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 SIRPB1O00241 398 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 TOR1AO14656 332 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 OR2H2O95918 312 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 MT-ND2P03891 347 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 ISG15P05161 165 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 ATF1P18846 271 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 CD24P25063 80 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 SLC6A1P30531 599 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 ATP6V1E1P36543 226 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 MNDAP41218 407 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 PTGFRP43088 359 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 KIR3DL2P43630 455 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 PRRX1P54821 245 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 KRTAP10-11P60412 298 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 KPNB1Q14974 876 aaKnown RBP10.23□□□□□ -0.77
PTCH1-221ENST00000550914 FDX2Q6P4F2 183 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 KCTD20Q7Z5Y7 419 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 ZDHHC13Q8IUH4 622 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 SAXO1Q8IYX7 474 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 OSR2Q8N2R0 312 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 OR4D6Q8NGJ1 314 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 OR8J1Q8NGP2 316 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 RNF166Q96A37 237 aaPredicted RBP10.23□□□□□ -0.77
PTCH1-221ENST00000550914 OPALINQ96PE5 141 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 PCDHB16Q9NRJ7 776 aa10.23□□□□□ -0.77
PTCH1-221ENST00000550914 WI2-2373I1.2A0A1W2PRP0 233 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 E9PQ18 207 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 KDM4BO94953 1096 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 ZNF20P17024 532 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 GLIPR1P48060 266 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 AESQ08117 197 aa10.22□□□□□ -0.77
PTCH1-221ENST00000550914 DCTN2Q13561 401 aaKnown RBP10.22□□□□□ -0.77
PTCH1-221ENST00000550914 TPTE2P1Q5T6R2 138 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms