RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 APH1BQ8WW43 257 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 RGP1Q92546 391 aaPredicted RBP3.94□□□□□ -1.78
SCAF11-214ENST00000550893 NRBF2Q96F24 287 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 REEP6Q96HR9 211 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 GAFA1Q96PS6 74 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 OR8B4Q96RC9 309 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 TEAD3Q99594 435 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 SLC29A1Q99808 456 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 GAL3ST1Q99999 423 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 FAM110AQ9BQ89 295 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 OSBPL10Q9BXB5 764 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 SEMA6AQ9H2E6 1030 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 NIPAL2Q9H841 368 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 ELL3Q9HB65 397 aaPredicted RBP3.94□□□□□ -1.78
SCAF11-214ENST00000550893 TUBG2Q9NRH3 451 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 UBAP1Q9NZ09 502 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 DNAJC27Q9NZQ0 273 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 MRPL15Q9P015 296 aaKnown RBP3.94□□□□□ -1.78
SCAF11-214ENST00000550893 EIF3KQ9UBQ5 218 aaKnown RBP3.94□□□□□ -1.78
SCAF11-214ENST00000550893 POLR1DQ9Y2S0 133 aa3.94□□□□□ -1.78
SCAF11-214ENST00000550893 DYNC2H1Q8NCM8 4307 aaKnown RBP3.93□□□□□ -1.78
SCAF11-214ENST00000550893 TRAV40A0A0B4J280 105 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 IGKV1-9A0A0C4DH69 117 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 KIR2DS1A0A191URI9 304 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 TMEM89A2RUT3 159 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 ISPDA4D126 451 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 RIIAD1A6NNX1 92 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 J3QLI3 93 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 LGALS8O00214 317 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 GYG2O15488 501 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 SYNGR1O43759 233 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 CST4P01036 141 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 SBK2P0C263 348 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 CFC1BP0CG36 223 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 CFC1P0CG37 223 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 PPIAL4GP0DN37 164 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 ANXA8P13928 327 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 MYOD1P15172 320 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 IFNGR2P38484 337 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 TGM4P49221 684 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 MNAT1P51948 309 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 ARHGDIAP52565 204 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 CRIP2P52943 208 aaPredicted RBP3.93□□□□□ -1.78
SCAF11-214ENST00000550893 DLX6P56179 175 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 ACTR3P61158 418 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 ERVK11-1P61568 191 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 BAK1Q16611 211 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 SLC35D3Q5M8T2 416 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 GGNBP1Q5YKI7 109 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 ARL9Q6T311 187 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 BRD3OSQ6XYD6 125 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 PGAP1Q75T13 922 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 CALHM1Q8IU99 346 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 PNKDQ8N490 385 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 OR5K1Q8NHB7 308 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 ANGPTL6Q8NI99 470 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 C8orf46Q8TAG6 207 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 RPS4Y2Q8TD47 263 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 C17orf50Q8WW18 174 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 PYDC1Q8WXC3 89 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 OR5P3Q8WZ94 311 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 RPL3LQ92901 407 aaKnown RBP3.93□□□□□ -1.78
SCAF11-214ENST00000550893 RAB39BQ96DA2 213 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 ZNF488Q96MN9 340 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 ZNF582Q96NG8 517 aaPredicted RBP3.93□□□□□ -1.78
SCAF11-214ENST00000550893 APOL4Q9BPW4 351 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 COPS4Q9BT78 406 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 OR51V1Q9H2C8 321 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 OR51I2Q9H344 312 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 HES4Q9HCC6 221 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 CENPMQ9NSP4 180 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 HAO2Q9NYQ3 351 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 USE1Q9NZ43 259 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 KAAG1Q9UBP8 84 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 NUFIP1Q9UHK0 495 aaKnown RBP3.93□□□□□ -1.78
SCAF11-214ENST00000550893 SLC22A13Q9Y226 551 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 MAB21L2Q9Y586 359 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 CEPT1Q9Y6K0 416 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 V9GYS6 101 aa3.93□□□□□ -1.78
SCAF11-214ENST00000550893 KMT2CQ8NEZ4 4911 aaKnown RBP3.93□□□□□ -1.78
SCAF11-214ENST00000550893 PLXNB1O43157 2135 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 A0A0G2JMP0 313 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 A0A0U1RQV5 110 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 CENPVL3A0A0U1RRI6 287 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 A0A0X1KG70 313 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 PQLC2LA1A4F0 135 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 OOEPA6NGQ2 149 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 RNASEK-C17orf49H0YIS7 233 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 H3BN98 237 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 EI24O14681 340 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 CDIPTO14735 213 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 PHYHO14832 338 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 XRCC2O43543 280 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 TCF21O43680 179 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 ZNF737O75373 536 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 WBP4O75554 376 aaKnown RBP3.92□□□□□ -1.78
SCAF11-214ENST00000550893 LALBAP00709 142 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 GYPAP02724 150 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 LYNP07948 512 aa3.92□□□□□ -1.78
SCAF11-214ENST00000550893 ERCC1P07992 297 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms