RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 PSPNO60542 156 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 KDM4BO94953 1096 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 CCDC159P0C7I6 412 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 BCL3P20749 454 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 HTR1DP28221 377 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 BRS3P32247 399 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 NPBWR2P48146 333 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 P2RX3P56373 397 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 NANOS3P60323 173 aaKnown RBP8.79□□□□□ -1
VTI1BP3-201ENST00000550220 KPNB1Q14974 876 aaKnown RBP8.79□□□□□ -1
VTI1BP3-201ENST00000550220 ZIK1Q3SY52 487 aaPredicted RBP8.79□□□□□ -1
VTI1BP3-201ENST00000550220 KLHL22Q53GT1 634 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 C16orf82Q7Z2V1 217 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 KLHDC1Q8N7A1 406 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 OR4S1Q8NGB4 309 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 OR52N4Q8NGI2 321 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 RHOXF1Q8NHV9 184 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 ZNF596Q8TC21 504 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 CORO2AQ92828 525 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 LGALS12Q96DT0 336 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 PELI1Q96FA3 418 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 C4orf36Q96KX1 117 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 NKX3-1Q99801 234 aaPredicted RBP8.79□□□□□ -1
VTI1BP3-201ENST00000550220 ALG8Q9BVK2 526 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.79□□□□□ -1
VTI1BP3-201ENST00000550220 GSTK1Q9Y2Q3 226 aa8.79□□□□□ -1
VTI1BP3-201ENST00000550220 IGHV2-26A0A0B4J1V2 119 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 MEGF11A6BM72 1044 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 LEUTXA8MZ59 168 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 H3BNX3 289 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 DEGS1O15121 323 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 TSPAN15O95858 294 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 OR2H2O95918 312 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 IGHA1P01876 353 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 OPN1MWP04001 364 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 CSN2P05814 226 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 OPN1MW2P0DN77 364 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 OPN1MW3P0DN78 364 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 VSIG10L2P0DP72 767 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 DUSP1P28562 367 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 CEACAM3P40198 252 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 OR3A1P47881 315 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 RAB13P51153 203 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 GBX2P52951 348 aaPredicted RBP8.78□□□□□ -1
VTI1BP3-201ENST00000550220 SLC34A1Q06495 639 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 HEPN1Q6WQI6 88 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 ABHD12Q8N2K0 398 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 PARP16Q8N5Y8 322 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 ZNF565Q8N9K5 539 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 OR13C9Q8NGT0 318 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 OR5AK2Q8NH90 309 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 NDNFQ8TB73 568 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 CAPSLQ8WWF8 208 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 CHST6Q9GZX3 395 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 OR6C3Q9NZP0 311 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 DPM3Q9P2X0 92 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 DHDHQ9UQ10 334 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 SIGLEC9Q9Y336 463 aa8.78□□□□□ -1
VTI1BP3-201ENST00000550220 A0A0G2JK05 382 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 LOC100130705A0A1B0GUX0 176 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 IRGMA1A4Y4 181 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 FAM90A22PA8MWA6 464 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 SIRPB1O00241 398 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 TOR1AO14656 332 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 SULT1B1O43704 296 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 XPNPEP2O43895 674 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 CHST1O43916 411 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 HCKP08631 526 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 TMEM225BP0DP42 221 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 ZNF44P15621 663 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 GABRB1P18505 474 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 MTNR1BP49286 362 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 PRRX1P54821 245 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 BDH1Q02338 343 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 KISS1Q15726 138 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 CCDC58Q4VC31 144 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 PLA1AQ53H76 456 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 ARSJQ5FYB0 599 aaPredicted RBP8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 LPCAT4Q643R3 524 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 TCF23Q7RTU1 214 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 LHFPL3Q86UP9 236 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 DYNAPQ8N1N2 210 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 TPRX1Q8N7U7 411 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 PXT1Q8NFP0 134 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 OR4F17Q8NGA8 305 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 OR4D6Q8NGJ1 314 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 STMN2Q93045 179 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 OR4F4Q96R69 305 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 NCOR1P1Q9H4R4 102 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 ZNF702PQ9H963 129 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 MRPS18AQ9NVS2 196 aaKnown RBP8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 ERVK13-1Q9NX77 482 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 MYRFQ9Y2G1 1151 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 HILPDAQ9Y5L2 63 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 NOTCH1P46531 2555 aa8.77□□□□□ -1.01
VTI1BP3-201ENST00000550220 IGKV1-12A0A0C4DH73 117 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 ODAMA1E959 279 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 ZNF729A6NN14 1252 aaPredicted RBP8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 OOSP1A8MZH6 123 aa8.76□□□□□ -1.01
VTI1BP3-201ENST00000550220 EBAG9O00559 213 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms