RNA–Protein interactions for RNA: ENST00000550075.5

CPSF6-205, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 540 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-205ENST00000550075 ELP2Q6IA86 826 aa21.33■■□□□ 1.01
CPSF6-205ENST00000550075 BCL6BQ8N143 479 aaPredicted RBP21.33■■□□□ 1.01
CPSF6-205ENST00000550075 CHST4Q8NCG5 386 aa21.33■■□□□ 1.01
CPSF6-205ENST00000550075 TMED9Q9BVK6 235 aa21.33■■□□□ 1.01
CPSF6-205ENST00000550075 UNKLQ9H9P5 680 aaKnown RBP21.33■■□□□ 1.01
CPSF6-205ENST00000550075 ZMAT3Q9HA38 289 aaKnown RBP21.33■■□□□ 1.01
CPSF6-205ENST00000550075 TRAV8-7A0A075B6U6 113 aa21.32■■□□□ 1
CPSF6-205ENST00000550075 A0A1W2PPK0 400 aa21.32■■□□□ 1
CPSF6-205ENST00000550075 TMEM82A0PJX8 343 aa21.32■■□□□ 1
CPSF6-205ENST00000550075 SIRPB1O00241 398 aa21.32■■□□□ 1
CPSF6-205ENST00000550075 DENRO43583 198 aaKnown RBP21.32■■□□□ 1
CPSF6-205ENST00000550075 HSMCR30P0CW71 290 aa21.32■■□□□ 1
CPSF6-205ENST00000550075 ZNF44P15621 663 aa21.32■■□□□ 1
CPSF6-205ENST00000550075 OR3A4PP47883 348 aa21.32■■□□□ 1
CPSF6-205ENST00000550075 SRSF2Q01130 221 aaKnown RBP21.32■■□□□ 1
CPSF6-205ENST00000550075 TUSC1Q2TAM9 212 aa21.32■■□□□ 1
CPSF6-205ENST00000550075 Q8N7P7 452 aa21.32■■□□□ 1
CPSF6-205ENST00000550075 NKAIN3Q8N8D7 197 aa21.32■■□□□ 1
CPSF6-205ENST00000550075 OR4M1Q8NGD0 313 aa21.32■■□□□ 1
CPSF6-205ENST00000550075 METTL9Q9H1A3 318 aa21.32■■□□□ 1
CPSF6-205ENST00000550075 NOX4Q9NPH5 578 aa21.32■■□□□ 1
CPSF6-205ENST00000550075 PCDHB16Q9NRJ7 776 aa21.32■■□□□ 1
CPSF6-205ENST00000550075 FBN1P35555 2871 aaKnown RBP21.32■■□□□ 1
CPSF6-205ENST00000550075 MGST3O14880 152 aa21.31■■□□□ 1
CPSF6-205ENST00000550075 OR2H2O95918 312 aa21.31■■□□□ 1
CPSF6-205ENST00000550075 PRTN3P24158 256 aa21.31■■□□□ 1
CPSF6-205ENST00000550075 MEF2CQ06413 473 aaPredicted RBP21.31■■□□□ 1
CPSF6-205ENST00000550075 MLLT11Q13015 90 aaPredicted RBP21.31■■□□□ 1
CPSF6-205ENST00000550075 EDDM3AQ14507 147 aa21.31■■□□□ 1
CPSF6-205ENST00000550075 TRAM1Q15629 374 aa21.31■■□□□ 1
CPSF6-205ENST00000550075 ACSM3Q53FZ2 586 aa21.31■■□□□ 1
CPSF6-205ENST00000550075 LIPKQ5VXJ0 399 aa21.31■■□□□ 1
CPSF6-205ENST00000550075 RUSC1-AS1Q66K80 236 aa21.31■■□□□ 1
CPSF6-205ENST00000550075 C17orf107Q6ZR85 190 aa21.31■■□□□ 1
CPSF6-205ENST00000550075 CDH26Q8IXH8 852 aa21.31■■□□□ 1
CPSF6-205ENST00000550075 JAGN1Q8N5M9 183 aa21.31■■□□□ 1
CPSF6-205ENST00000550075 IL36GQ9NZH8 169 aa21.31■■□□□ 1
CPSF6-205ENST00000550075 FUOMA2VDF0 154 aa21.3■■□□□ 1
CPSF6-205ENST00000550075 MRPS14O60783 128 aaKnown RBP21.3■■□□□ 1
CPSF6-205ENST00000550075 ZNF780AO75290 641 aaPredicted RBP21.3■■□□□ 1
CPSF6-205ENST00000550075 CSTBP04080 98 aaKnown RBP21.3■■□□□ 1
CPSF6-205ENST00000550075 PSMA1P25786 263 aaKnown RBP21.3■■□□□ 1
CPSF6-205ENST00000550075 IL13RA2Q14627 380 aa21.3■■□□□ 1
CPSF6-205ENST00000550075 TMEM200BQ69YZ2 307 aa21.3■■□□□ 1
CPSF6-205ENST00000550075 ASCL4Q6XD76 172 aa21.3■■□□□ 1
CPSF6-205ENST00000550075 ZNF367Q7RTV3 350 aa21.3■■□□□ 1
CPSF6-205ENST00000550075 ZDHHC16Q969W1 377 aa21.3■■□□□ 1
CPSF6-205ENST00000550075 C19orf24Q9BVV8 132 aa21.3■■□□□ 1
CPSF6-205ENST00000550075 CHST6Q9GZX3 395 aa21.3■■□□□ 1
CPSF6-205ENST00000550075 ING4Q9UNL4 249 aa21.3■■□□□ 1
CPSF6-205ENST00000550075 hADV38S2A0JD32 116 aa21.29■■□□□ 1
CPSF6-205ENST00000550075 MEGF11A6BM72 1044 aa21.29■■□□□ 1
CPSF6-205ENST00000550075 HTR3BO95264 441 aa21.29■■□□□ 1
CPSF6-205ENST00000550075 SCN1BQ07699 218 aa21.29■■□□□ 1
CPSF6-205ENST00000550075 BAMBIQ13145 260 aa21.29■■□□□ 1
CPSF6-205ENST00000550075 TPBGQ13641 420 aa21.29■■□□□ 1
CPSF6-205ENST00000550075 SVOPQ8N4V2 548 aa21.29■■□□□ 1
CPSF6-205ENST00000550075 OR51T1Q8NGJ9 327 aa21.29■■□□□ 1
CPSF6-205ENST00000550075 ZNF48Q96MX3 618 aaPredicted RBP21.29■■□□□ 1
CPSF6-205ENST00000550075 TCF7L1Q9HCS4 588 aa21.29■■□□□ 1
CPSF6-205ENST00000550075 MAGEA13PA6NCF6 341 aa21.28■■□□□ 1
CPSF6-205ENST00000550075 DEGS1O15121 323 aa21.28■■□□□ 1
CPSF6-205ENST00000550075 PSPNO60542 156 aa21.28■■□□□ 1
CPSF6-205ENST00000550075 CDRT1O95170 752 aa21.28■■□□□ 1
CPSF6-205ENST00000550075 MAS1P04201 325 aa21.28■■□□□ 1
CPSF6-205ENST00000550075 LMO1P25800 156 aa21.28■■□□□ 1
CPSF6-205ENST00000550075 MAP2K4P45985 399 aa21.28■■□□□ 1
CPSF6-205ENST00000550075 OR3A1P47881 315 aa21.28■■□□□ 1
CPSF6-205ENST00000550075 GPR176Q14439 515 aa21.28■■□□□ 1
CPSF6-205ENST00000550075 ZNF273Q14593 569 aa21.28■■□□□ 1
CPSF6-205ENST00000550075 PDZD9Q8IXQ8 264 aa21.28■■□□□ 1
CPSF6-205ENST00000550075 Q8NFD4 153 aa21.28■■□□□ 1
CPSF6-205ENST00000550075 OR4S1Q8NGB4 309 aa21.28■■□□□ 1
CPSF6-205ENST00000550075 OR10K1Q8NGX5 313 aa21.28■■□□□ 1
CPSF6-205ENST00000550075 NR1H4Q96RI1 486 aaPredicted RBP21.28■■□□□ 1
CPSF6-205ENST00000550075 MGLLQ99685 303 aa21.28■■□□□ 1
CPSF6-205ENST00000550075 NKX3-1Q99801 234 aaPredicted RBP21.28■■□□□ 1
CPSF6-205ENST00000550075 YTHDF1Q9BYJ9 559 aaKnown RBP21.28■■□□□ 1
CPSF6-205ENST00000550075 LINC00312Q9Y6C7 94 aa21.28■■□□□ 1
CPSF6-205ENST00000550075 DSCAML1Q8TD84 2053 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 DNAJC9-AS1A6NH13 148 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 RNASEK-C17orf49H0YIS7 233 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 PIN1P1O15428 100 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 RBP4P02753 201 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 CPEP16870 476 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 ERP29P30040 261 aaKnown RBP21.27■■□□□ 1
CPSF6-205ENST00000550075 UBE2E1P51965 193 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 P2RX3P56373 397 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 ERVFRD-1P60508 538 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 DEFB112Q30KQ8 113 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 UNQ9370/PRO34162Q6UXP9 181 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 PHC2Q8IXK0 858 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 OSR2Q8N2R0 312 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 ZDHHC22Q8N966 263 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 PHYHIPQ92561 330 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 SLITRK2Q9H156 845 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 HEXA-AS1Q9H8Q6 139 aa21.27■■□□□ 1
CPSF6-205ENST00000550075 MRPS28Q9Y2Q9 187 aaKnown RBP21.27■■□□□ 1
CPSF6-205ENST00000550075 CSN2P05814 226 aa21.26■□□□□ 0.99
CPSF6-205ENST00000550075 ZNF728P0DKX0 622 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms