RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 MNDAP41218 407 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 NPBWR2P48146 333 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 PRRX1P54821 245 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 P2RX3P56373 397 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 CXCR4P61073 352 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 RPL23AP62750 156 aaKnown RBP7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 ZNF91Q05481 1191 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 KHDC1LQ5JSQ8 128 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 SPIN3Q5JUX0 258 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 TPTE2P1Q5T6R2 138 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 CCDC144NLQ6NUI1 221 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 BAIAP2L2Q6UXY1 529 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 MEPCEQ7L2J0 689 aaKnown RBP7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 OR2W3Q7Z3T1 314 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 ADGRG5Q8IZF4 528 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 FAM58AQ8N1B3 248 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 DNAAF1Q8NEP3 725 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 TRMT10AQ8TBZ6 339 aaKnown RBP7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 BCAS4Q8TDM0 211 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 CHPT1Q8WUD6 406 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 EMG1Q92979 244 aaKnown RBP7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 C10orf35Q96D05 121 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 CNN2Q99439 309 aaKnown RBP7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 CHST6Q9GZX3 395 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 GAL3ST2Q9H3Q3 398 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 CLN6Q9NWW5 311 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 TVP23BQ9NYZ1 205 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 GLS2Q9UI32 602 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 MRM2Q9UI43 246 aaKnown RBP7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 GTF2A1LQ9UNN4 478 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 ARL2BPQ9Y2Y0 163 aa7.8□□□□□ -1.16
TRAFD1-207ENST00000550051 TRGV10A0A0A0MS01 117 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 TRBV2A0A0J9YWF9 115 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 SH2D7A6NKC9 451 aaPredicted RBP7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 ZNF670-ZNF695F2Z2N8 137 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 H0YHG0 523 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 TOR1AO14656 332 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 SH2D1BO14796 132 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 ENTPD6O75354 484 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 GATBO75879 557 aaKnown RBP7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 DCTN3O75935 186 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 CDK2P24941 298 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 DUSP1P28562 367 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 OR3A1P47881 315 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 CRISP1P54107 249 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 KPNB1Q14974 876 aaKnown RBP7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 HLA-DRB5Q30154 266 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 NKAPLQ5M9Q1 402 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 AADACL4Q5VUY2 407 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 TRAPPC6BQ86SZ2 158 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 ZNF329Q86UD4 541 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 SLC35F2Q8IXU6 374 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 HS3ST5Q8IZT8 346 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 COMMD1Q8N668 190 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 DNAJC9Q8WXX5 260 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 PP6455Q8WZ26 134 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 ASB9Q96DX5 294 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 BORCS8Q96FH0 119 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 LRGUKQ96M69 825 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 ZNF649Q9BS31 505 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 TTTY10Q9BZA0 68 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 CHST5Q9GZS9 411 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 FAM107BQ9H098 131 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 ADGRL4Q9HBW9 690 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 IL36RNQ9UBH0 155 aa7.79□□□□□ -1.16
TRAFD1-207ENST00000550051 AQP12BA6NM10 295 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 SYT7O43581 403 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 PRKYO43930 277 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 INMTO95050 263 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 CYB5AP00167 134 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 CSN2P05814 226 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 CCDC159P0C7I6 412 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 CGB3P0DN86 165 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 CGB7P0DN87 165 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 OR3A4PP47883 348 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 RBP2P50120 134 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 ATP1B3P54709 279 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 PTGES3Q15185 160 aaKnown RBP7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 C9orf152Q5JTZ5 239 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 PRAMEF5Q5TYX0 476 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 NXNL2Q5VZ03 156 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 PLEKHG7Q6ZR37 379 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 C8orf86Q6ZUL3 223 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 CATSPERDQ86XM0 798 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 AQP12AQ8IXF9 295 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 CANT1Q8WVQ1 401 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 TFAP2CQ92754 450 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 NRBF2Q96F24 287 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 NSL1Q96IY1 281 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 ADI1Q9BV57 179 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 PLEKHA1Q9HB21 404 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 RHOFQ9HBH0 211 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 ZNF286AQ9HBT8 521 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 HMG20AQ9NP66 347 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 PCDHB16Q9NRJ7 776 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 RBFOX1Q9NWB1 397 aaKnown RBP7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 H2AFY2Q9P0M6 372 aaPredicted RBP7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 MOB4Q9Y3A3 225 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 HSPE1-MOB4S4R3N1 261 aa7.78□□□□□ -1.16
TRAFD1-207ENST00000550051 METTL15A6NJ78 407 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms