RNA–Protein interactions for RNA: ENST00000548573.5

SMARCD1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5 BASIC

Gene SMARCD1, Length 2,095 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-205ENST00000548573 GLI4P10075 376 aa8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 LIFP15018 202 aa8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 AADACP22760 399 aa8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 NKX2-1P43699 371 aaPredicted RBP8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 COL19A1Q14993 1142 aa8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 RAET1LQ5VY80 246 aa8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 SP5Q6BEB4 398 aaPredicted RBP8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 MRPL14Q6P1L8 145 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 OR2G3Q8NGZ4 309 aa8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 ZNF837Q96EG3 531 aaPredicted RBP8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 TECTBQ96PL2 329 aa8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 RARRES2Q99969 163 aa8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 PAPOLGQ9BWT3 736 aaKnown RBP8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 TMEM222Q9H0R3 208 aa8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 HIPK2Q9H2X6 1198 aa8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 SLC7A11Q9UPY5 501 aa8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 PUS1Q9Y606 427 aaKnown RBP eCLIP8.55□□□□□ -1.04
SMARCD1-205ENST00000548573 MYO7BQ6PIF6 2116 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 LOC102723996A0A087X1L8 192 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 DUXBA0A1W2PPF3 345 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 IGSF23A1L1A6 192 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 FAM221AA4D161 298 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 NKX2-6A6NCS4 301 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 OR6C6A6NF89 314 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 FAM24AA6NFZ4 105 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 ZNF732B4DXR9 585 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 TXNL1O43396 289 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 DNPH1O43598 174 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 ZIC3O60481 467 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 LCATP04180 440 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 HOXA5P20719 270 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 RND3P61587 244 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 PCOLCEQ15113 449 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 BRICD5Q6PL45 260 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 MEX3BQ6ZN04 569 aaKnown RBP8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 Q6ZS49 121 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 TMEM252Q8N6L7 170 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 LINC00469Q8N7U9 141 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 LYRM2Q9NU23 88 aaPredicted RBP8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 SPAG17Q6Q759 2223 aa8.54□□□□□ -1.04
SMARCD1-205ENST00000548573 hCG_38984A0A1B0GV85 526 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 CLEC18AA5D8T8 446 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 ZNF724A8MTY0 619 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 H3BQ15 152 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 GPR37O15354 613 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 SRP19P09132 144 aaKnown RBP8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 FBP1P09467 338 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 MMP9P14780 707 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 FUT3P21217 361 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 HTR5AP47898 357 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 RBM11P57052 281 aaKnown RBP8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 RAB2AP61019 212 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 RAC1P63000 192 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 BAXQ07812 192 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 SRSF7Q16629 238 aaKnown RBP eCLIP8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 ACER2Q5QJU3 275 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 ZNF774Q6NX45 483 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 Q6ZPA2 131 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 ZNF695Q8IW36 515 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 CLEC18CQ8NCF0 446 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 GNPNAT1Q96EK6 184 aaPredicted RBP8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 TOLLIPQ9H0E2 274 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 PROK2Q9HC23 129 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 FAM86C1Q9NVL1 165 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 TMEM38BQ9NVV0 291 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 TINAGQ9UJW2 476 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 CEP192Q8TEP8 1941 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 A0A0J9YW62 118 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 IGHV5-10-1A0A0J9YXX1 117 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 A0A1B0GV50 99 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 MED19A0JLT2 244 aaPredicted RBP8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 CXorf65A6NEN9 183 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 GJE1A6NN92 205 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 HSD17B6O14756 317 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 TNFSF11O14788 317 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 HSPB1P04792 205 aaKnown RBP8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 GNRHRP30968 328 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 CDX1P47902 265 aaPredicted RBP8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 ASCL1P50553 236 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 CCL20P78556 96 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 KIAA0141Q14154 515 aaPredicted RBP8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 DPPA2Q7Z7J5 298 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 WDR5BQ86VZ2 330 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 ZFP62Q8NB50 900 aaPredicted RBP8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 CPT1CQ8TCG5 803 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 EDARADDQ8WWZ3 215 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 MR1Q95460 341 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 ZNF442Q9H7R0 627 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 WDR54Q9H977 334 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 DKKL1Q9UK85 242 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 CA14Q9ULX7 337 aa8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 UBE2J1Q9Y385 318 aaPredicted RBP8.53□□□□□ -1.04
SMARCD1-205ENST00000548573 A0A1W2PQM1 296 aa8.52□□□□□ -1.05
SMARCD1-205ENST00000548573 FAM90A10PA6NDY2 464 aa8.52□□□□□ -1.05
SMARCD1-205ENST00000548573 FAM90A18PA6NE21 464 aa8.52□□□□□ -1.05
SMARCD1-205ENST00000548573 FAM90A16PA6NEW6 464 aa8.52□□□□□ -1.05
SMARCD1-205ENST00000548573 FAM90A20PA6NIJ5 464 aa8.52□□□□□ -1.05
SMARCD1-205ENST00000548573 FAM90A8PA6NJQ4 464 aa8.52□□□□□ -1.05
SMARCD1-205ENST00000548573 FAM90A7PA6NKC0 464 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms