RNA–Protein interactions for RNA: ENST00000547872.1

CBX5-203, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 745 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-203ENST00000547872 PIGWQ7Z7B1 504 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 DPPA2Q7Z7J5 298 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 C10orf107Q8IVU9 208 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 BATF2Q8N1L9 274 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 TMEM185AQ8NFB2 350 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 OR4M1Q8NGD0 313 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 RPS4Y2Q8TD47 263 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 NPRL2Q8WTW4 380 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 SPRYD4Q8WW59 207 aaPredicted RBP3.21□□□□□ -1.9
CBX5-203ENST00000547872 MAL2Q969L2 176 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 HAVCR1Q96D42 359 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 NOL4LQ96MY1 436 aaPredicted RBP3.21□□□□□ -1.9
CBX5-203ENST00000547872 FAM218AQ96MZ4 157 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 CCDC115Q96NT0 180 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 ERP44Q9BS26 406 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 ARMC7Q9H6L4 198 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 SIAEQ9HAT2 523 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 TMEM27Q9HBJ8 222 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 GPN1Q9HCN4 374 aaPredicted RBP3.21□□□□□ -1.9
CBX5-203ENST00000547872 EMCNQ9ULC0 261 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 PRPF19Q9UMS4 504 aaKnown RBP3.21□□□□□ -1.9
CBX5-203ENST00000547872 UGT2A1Q9Y4X1 527 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 TIMM10BQ9Y5J6 103 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 HERC2O95714 4834 aa3.21□□□□□ -1.9
CBX5-203ENST00000547872 A6NDX4 124 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 H3BSA7 217 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 SGCEO43556 437 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 TPST1O60507 370 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 FMO6PO60774 539 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 LYPLA1O75608 230 aaPredicted RBP3.2□□□□□ -1.9
CBX5-203ENST00000547872 ECDO95905 644 aaPredicted RBP3.2□□□□□ -1.9
CBX5-203ENST00000547872 CCL3L1P16619 93 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 TCP1P17987 556 aaKnown RBP3.2□□□□□ -1.9
CBX5-203ENST00000547872 S100A3P33764 101 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 AQP2P41181 271 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 POU3F4P49335 361 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 DAP3P51398 398 aaKnown RBP3.2□□□□□ -1.9
CBX5-203ENST00000547872 KRTAP10-5P60370 271 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 DSTNP60981 165 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 RPL23AP62750 156 aaKnown RBP3.2□□□□□ -1.9
CBX5-203ENST00000547872 RPL18Q07020 188 aaKnown RBP3.2□□□□□ -1.9
CBX5-203ENST00000547872 SELPLGQ14242 412 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 ENDOGQ14249 297 aaKnown RBP3.2□□□□□ -1.9
CBX5-203ENST00000547872 OR1Q1Q15612 314 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 MAPK11Q15759 364 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 MICBQ29980 383 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 HCP5Q6MZN7 132 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 ULK3Q6PHR2 472 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 RNF165Q6ZSG1 346 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 CYS1Q717R9 158 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 SLC36A1Q7Z2H8 476 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 MRPL21Q7Z2W9 205 aaKnown RBP3.2□□□□□ -1.9
CBX5-203ENST00000547872 OR2W3Q7Z3T1 314 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 NET1Q7Z628 596 aaPredicted RBP3.2□□□□□ -1.9
CBX5-203ENST00000547872 CROCCP3Q8IVE0 287 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 C4orf33Q8N1A6 199 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 PRSS35Q8N3Z0 413 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 OR52H1Q8NGJ2 320 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 OR8S1Q8NH09 359 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 PFN4Q8NHR9 129 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 C11orf45Q8TAV5 145 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 NDNFQ8TB73 568 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 SETD6Q8TBK2 473 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 PIFOQ8TCI5 191 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 MIPOL1Q8TD10 442 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 ACOT11Q8WXI4 607 aaPredicted RBP3.2□□□□□ -1.9
CBX5-203ENST00000547872 TNFRSF14Q92956 283 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 PTP4A1Q93096 173 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 SLCO4A1Q96BD0 722 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 SLC41A3Q96GZ6 507 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 OR5B12Q96R08 314 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 NAPGQ99747 312 aaPredicted RBP3.2□□□□□ -1.9
CBX5-203ENST00000547872 OVOL2Q9BRP0 275 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 HCAR1Q9BXC0 346 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 RAB17Q9H0T7 212 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 METTL8Q9H825 291 aaKnown RBP3.2□□□□□ -1.9
CBX5-203ENST00000547872 SLCO1B3Q9NPD5 702 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 ISYNA1Q9NPH2 558 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 TAS2R5Q9NYW4 299 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 ZMAT5Q9UDW3 170 aaKnown RBP3.2□□□□□ -1.9
CBX5-203ENST00000547872 AURKCQ9UQB9 309 aa3.2□□□□□ -1.9
CBX5-203ENST00000547872 NUP214P35658 2090 aaPredicted RBP3.2□□□□□ -1.9
CBX5-203ENST00000547872 A0A087WZ39 114 aa3.19□□□□□ -1.9
CBX5-203ENST00000547872 LOC102725191A0A1B0GVB3 256 aa3.19□□□□□ -1.9
CBX5-203ENST00000547872 GGT3PA6NGU5 568 aa3.19□□□□□ -1.9
CBX5-203ENST00000547872 C12orf71A8MTZ7 269 aa3.19□□□□□ -1.9
CBX5-203ENST00000547872 IQCF6A8MYZ5 107 aa3.19□□□□□ -1.9
CBX5-203ENST00000547872 E9PBE3 544 aa3.19□□□□□ -1.9
CBX5-203ENST00000547872 F5H5K5 113 aa3.19□□□□□ -1.9
CBX5-203ENST00000547872 RFXANKO14593 260 aa3.19□□□□□ -1.9
CBX5-203ENST00000547872 RER1O15258 196 aa3.19□□□□□ -1.9
CBX5-203ENST00000547872 PRAF2O60831 178 aa3.19□□□□□ -1.9
CBX5-203ENST00000547872 SAP30O75446 220 aa3.19□□□□□ -1.9
CBX5-203ENST00000547872 GP9P14770 177 aa3.19□□□□□ -1.9
CBX5-203ENST00000547872 CPA3P15088 417 aa3.19□□□□□ -1.9
CBX5-203ENST00000547872 GATA1P15976 413 aaPredicted RBP3.19□□□□□ -1.9
CBX5-203ENST00000547872 SPNP16150 400 aa3.19□□□□□ -1.9
CBX5-203ENST00000547872 MSR1P21757 451 aa3.19□□□□□ -1.9
CBX5-203ENST00000547872 GGT2P36268 569 aa3.19□□□□□ -1.9
CBX5-203ENST00000547872 CAPGP40121 348 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms