RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 ZNF182P17025 639 aaPredicted RBP10.07□□□□□ -0.8
HDAC7-226ENST00000547259 FGF12P61328 243 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 ERVK11-1P61568 191 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 ZMYND11Q15326 602 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 MICBQ29980 383 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 C2orf76Q3KRA6 126 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 OR2W3Q7Z3T1 314 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 OSR2Q8N2R0 312 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 MUC20Q8N307 709 aaPredicted RBP10.07□□□□□ -0.8
HDAC7-226ENST00000547259 DEFB108BQ8NET1 73 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 CLDND2Q8NHS1 167 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 LGALS14Q8TCE9 139 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 AP3S1Q92572 193 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 RAB39BQ96DA2 213 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 SEH1LQ96EE3 360 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 MRI1Q9BV20 369 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 BARHL1Q9BZE3 327 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 BANF2Q9H503 90 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 HES4Q9HCC6 221 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 HMG20AQ9NP66 347 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 ABRACLQ9P1F3 81 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 NLKQ9UBE8 527 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 OR14J1Q9UGF5 321 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 WIPI2Q9Y4P8 454 aa10.07□□□□□ -0.8
HDAC7-226ENST00000547259 TRAV38-1A0A0B4J264 116 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 TMEM272A0A1B0GTI8 110 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 TMEM89A2RUT3 159 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 J3QLI3 93 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 VENTXO95231 258 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 KNG1P01042 644 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 IGHV2-70P01814 119 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 MUC1P15941 1255 aaPredicted RBP10.06□□□□□ -0.8
HDAC7-226ENST00000547259 GATA3P23771 443 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 MDH2P40926 338 aaKnown RBP10.06□□□□□ -0.8
HDAC7-226ENST00000547259 HILS1P60008 231 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 UNC119Q13432 240 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 KCNJ8Q15842 424 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 PIGYQ3MUY2 71 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 TEX36Q5VZQ5 186 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 ELP2Q6IA86 826 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 OR10K2Q6IF99 312 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 FAHD2BQ6P2I3 314 aaPredicted RBP10.06□□□□□ -0.8
HDAC7-226ENST00000547259 FAM90A1Q86YD7 464 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 TMEM104Q8NE00 496 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 KCNG3Q8TAE7 436 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 KCTD12Q96CX2 325 aaKnown RBP10.06□□□□□ -0.8
HDAC7-226ENST00000547259 FAHD2AQ96GK7 314 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 SUCNR1Q9BXA5 334 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 TMEM59Q9BXS4 323 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 SELENOIQ9C0D9 397 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 IL36RNQ9UBH0 155 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 OR5V1Q9UGF6 321 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 GLS2Q9UI32 602 aa10.06□□□□□ -0.8
HDAC7-226ENST00000547259 A0A0G2JMP0 313 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 A0A0X1KG70 313 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 NKX6-3A6NJ46 265 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 OR2AT4A6NND4 320 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 TMEM14DPA8MWL7 114 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 PAHP00439 452 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 GYPAP02724 150 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 RBM11P57052 281 aaKnown RBP10.05□□□□□ -0.8
HDAC7-226ENST00000547259 SCAND1P57086 179 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 IL13RA2Q14627 380 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 ZNF404Q494X3 552 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 SPIN3Q5JUX0 258 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 STUMQ69YW2 141 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 MZT2AQ6P582 158 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 Q8NFD4 153 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 OR4M2Q8NGB6 313 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 OR5T2Q8NGG2 359 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 OR51T1Q8NGJ9 327 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 ACOT12Q8WYK0 555 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 MRPS24Q96EL2 167 aaKnown RBP10.05□□□□□ -0.8
HDAC7-226ENST00000547259 GAL3ST1Q99999 423 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 URM1Q9BTM9 101 aaKnown RBP10.05□□□□□ -0.8
HDAC7-226ENST00000547259 NARFLQ9H6Q4 476 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 ST3GAL6Q9Y274 331 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 ETV7Q9Y603 341 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 PKD1L1Q8TDX9 2849 aa10.05□□□□□ -0.8
HDAC7-226ENST00000547259 RFPL4AA6NLU0 287 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 RFPL4AL1F8VTS6 287 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 LDLRAD4O15165 306 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 HAND1O96004 215 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 TFF1P04155 84 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 PSG2P11465 335 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 RAB6AP20340 208 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 EPHA1P21709 976 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 CPT2P23786 658 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 GABRR1P24046 479 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 FPR2P25090 351 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 DUSP1P28562 367 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 GABRA2P47869 451 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 CEBPDP49716 269 aaPredicted RBP10.04□□□□□ -0.8
HDAC7-226ENST00000547259 LMO4P61968 165 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 RPS27AP62979 156 aaKnown RBP10.04□□□□□ -0.8
HDAC7-226ENST00000547259 QRFPP83859 136 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 IKZF1Q13422 519 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 TMEM155Q4W5P6 130 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 NHLRC3Q5JS37 347 aa10.04□□□□□ -0.8
HDAC7-226ENST00000547259 DCDC5Q6ZRR9 648 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms