RNA–Protein interactions for RNA: ENST00000546534.1

SCAF11-208, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 705 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-208ENST00000546534 NIPSNAP1Q9BPW8 284 aa10□□□□□ -0.81
SCAF11-208ENST00000546534 MROQ9BYG7 248 aa10□□□□□ -0.81
SCAF11-208ENST00000546534 TTTY10Q9BZA0 68 aa10□□□□□ -0.81
SCAF11-208ENST00000546534 GAL3ST2Q9H3Q3 398 aa10□□□□□ -0.81
SCAF11-208ENST00000546534 SEBOXQ9HB31 216 aaPredicted RBP10□□□□□ -0.81
SCAF11-208ENST00000546534 GTF2A1LQ9UNN4 478 aa10□□□□□ -0.81
SCAF11-208ENST00000546534 U3KQV3 271 aa10□□□□□ -0.81
SCAF11-208ENST00000546534 DNAH7Q8WXX0 4024 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 LINC01548A6NM66 108 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 H3BN98 237 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 TOR1AO14656 332 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 IGHG2P01859 326 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 OR3A1P47881 315 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 RIDAP52758 137 aaKnown RBP9.99□□□□□ -0.81
SCAF11-208ENST00000546534 RPS7P62081 194 aaKnown RBP9.99□□□□□ -0.81
SCAF11-208ENST00000546534 ROM1Q03395 351 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 ZNF91Q05481 1191 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 ZNF829Q3KNS6 432 aaPredicted RBP9.99□□□□□ -0.81
SCAF11-208ENST00000546534 TEX38Q6PEX7 206 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 CD300LDQ6UXZ3 194 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 OVCH2Q7RTZ1 564 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 ZNF679Q8IYX0 411 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 OR56B4Q8NH76 319 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 EMG1Q92979 244 aaKnown RBP9.99□□□□□ -0.81
SCAF11-208ENST00000546534 CMTM5Q96DZ9 223 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 YIPF3Q9GZM5 350 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 COPS3Q9UNS2 423 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 SLC7A11Q9UPY5 501 aa9.99□□□□□ -0.81
SCAF11-208ENST00000546534 TRGV10A0A0A0MS01 117 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 FGF16O43320 207 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 ZNF254O75437 659 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 SRSF10O75494 262 aaKnown RBP9.98□□□□□ -0.81
SCAF11-208ENST00000546534 MRPL3P09001 348 aaKnown RBP9.98□□□□□ -0.81
SCAF11-208ENST00000546534 TMEM11P17152 192 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 SLC2A5P22732 501 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 MAGEA2P43356 314 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 CDX1P47902 265 aaPredicted RBP9.98□□□□□ -0.81
SCAF11-208ENST00000546534 PRRX1P54821 245 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 HNF4GQ14541 408 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 GINS1Q14691 196 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 PNLIPRP3Q17RR3 467 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 SLC35D3Q5M8T2 416 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 SLC25A26Q70HW3 274 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 FOXRED2Q8IWF2 684 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 ELMOD2Q8IZ81 293 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 CORO2AQ92828 525 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 TOMM40LQ969M1 308 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 TAS2R3Q9NYW6 316 aa9.98□□□□□ -0.81
SCAF11-208ENST00000546534 NKX1-2Q9UD57 310 aaPredicted RBP9.98□□□□□ -0.81
SCAF11-208ENST00000546534 SAMHD1Q9Y3Z3 626 aaKnown RBP9.98□□□□□ -0.81
SCAF11-208ENST00000546534 LOC110117498-PIK3R3F6TDL0 507 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 CALCBP10092 127 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 GLIPR1P48060 266 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 NPBWR2P48146 333 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 SNU13P55769 128 aaKnown RBP9.97□□□□□ -0.81
SCAF11-208ENST00000546534 APOFQ13790 326 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 HES1Q14469 280 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 KPNB1Q14974 876 aaKnown RBP9.97□□□□□ -0.81
SCAF11-208ENST00000546534 UBE2V2Q15819 145 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 BCL2L15Q5TBC7 163 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 CYP2R1Q6VVX0 501 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 Q6ZSR3 168 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 ENTHD1Q8IYW4 607 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 DRAM1Q8N682 238 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 OR10G2Q8NGC3 310 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 ASB17Q8WXJ9 295 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 RPEQ96AT9 228 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 FEVQ99581 238 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 APOL4Q9BPW4 351 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 MRPL18Q9H0U6 180 aaKnown RBP9.97□□□□□ -0.81
SCAF11-208ENST00000546534 ZMAT4Q9H898 229 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 RBFOX1Q9NWB1 397 aaKnown RBP9.97□□□□□ -0.81
SCAF11-208ENST00000546534 GLS2Q9UI32 602 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 IKZF2Q9UKS7 526 aa9.97□□□□□ -0.81
SCAF11-208ENST00000546534 A0A087X0M5 115 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 A0A1B0GX30 115 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 A0A1W2PPI3 338 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 DHRS7CA6NNS2 312 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 SIRPB1O00241 398 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 MAGEB4O15481 346 aaPredicted RBP9.96□□□□□ -0.82
SCAF11-208ENST00000546534 ENTPD6O75354 484 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 E2F6O75461 281 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 FRMD6-AS1P0C7T7 363 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 FUT6P51993 359 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 AESQ08117 197 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 FHL3Q13643 280 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 DIAPH2-AS1Q14236 149 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 ZNF146Q15072 292 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 CXorf66Q5JRM2 361 aaPredicted RBP9.96□□□□□ -0.82
SCAF11-208ENST00000546534 OR2T5Q6IEZ7 315 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 Q8IYB0 196 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 FAM58AQ8N1B3 248 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 OR4D6Q8NGJ1 314 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 OR2T29Q8NH02 315 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 LYSTQ99698 3801 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 REEP1Q9H902 201 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 PCDHB16Q9NRJ7 776 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 OR52A1Q9UKL2 312 aa9.96□□□□□ -0.82
SCAF11-208ENST00000546534 SIRT4Q9Y6E7 314 aaPredicted RBP9.96□□□□□ -0.82
SCAF11-208ENST00000546534 TRBV2A0A0J9YWF9 115 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms