RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 FOXRED1Q96CU9 486 aaPredicted RBP13.9□□□□□ -0.18
LTBR-215ENST00000546296 SNX22Q96L94 193 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 UQCC2Q9BRT2 126 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 PCGF1Q9BSM1 259 aa13.9□□□□□ -0.18
LTBR-215ENST00000546296 ARHGAP32A7KAX9 2087 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 TRBV23-1A0A0A0MS06 115 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 TMEM82A0PJX8 343 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 OR2H2O95918 312 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 IFNA2P01563 188 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 SERPINA2P20848 420 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 RPL31P62899 125 aaKnown RBP13.89□□□□□ -0.19
LTBR-215ENST00000546296 SCGB2A2Q13296 93 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 GPR176Q14439 515 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 PDCD1Q15116 288 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 GRK1Q15835 563 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 AWAT2Q6E213 333 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 OSR2Q8N2R0 312 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 TBC1D15Q8TC07 691 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 WDFY2Q96P53 400 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 CHST6Q9GZX3 395 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 VCX3AQ9NNX9 186 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 IL36GQ9NZH8 169 aa13.89□□□□□ -0.19
LTBR-215ENST00000546296 ZNF737O75373 536 aa13.88□□□□□ -0.19
LTBR-215ENST00000546296 EDDM3BP56851 147 aa13.88□□□□□ -0.19
LTBR-215ENST00000546296 BLMHQ13867 455 aa13.88□□□□□ -0.19
LTBR-215ENST00000546296 EDDM3AQ14507 147 aa13.88□□□□□ -0.19
LTBR-215ENST00000546296 OR8H2Q8N162 312 aa13.88□□□□□ -0.19
LTBR-215ENST00000546296 CHST4Q8NCG5 386 aa13.88□□□□□ -0.19
LTBR-215ENST00000546296 Q8NFD4 153 aa13.88□□□□□ -0.19
LTBR-215ENST00000546296 OR4D6Q8NGJ1 314 aa13.88□□□□□ -0.19
LTBR-215ENST00000546296 C8orf46Q8TAG6 207 aa13.88□□□□□ -0.19
LTBR-215ENST00000546296 DMRTB1Q96MA1 342 aa13.88□□□□□ -0.19
LTBR-215ENST00000546296 C19orf12Q9NSK7 152 aa13.88□□□□□ -0.19
LTBR-215ENST00000546296 ST3GAL6Q9Y274 331 aa13.88□□□□□ -0.19
LTBR-215ENST00000546296 ZFHX3Q15911 3703 aa13.88□□□□□ -0.19
LTBR-215ENST00000546296 A0A0G2JK05 382 aa13.87□□□□□ -0.19
LTBR-215ENST00000546296 TRDV1A0A1B0GX56 115 aa13.87□□□□□ -0.19
LTBR-215ENST00000546296 A0A1W2PPH5 198 aa13.87□□□□□ -0.19
LTBR-215ENST00000546296 PSPNO60542 156 aa13.87□□□□□ -0.19
LTBR-215ENST00000546296 GTF2F2P13984 249 aa13.87□□□□□ -0.19
LTBR-215ENST00000546296 IL13RA2Q14627 380 aa13.87□□□□□ -0.19
LTBR-215ENST00000546296 PIGYQ3MUY2 71 aa13.87□□□□□ -0.19
LTBR-215ENST00000546296 SYT6Q5T7P8 510 aaPredicted RBP13.87□□□□□ -0.19
LTBR-215ENST00000546296 Q6P435 159 aa13.87□□□□□ -0.19
LTBR-215ENST00000546296 C17orf107Q6ZR85 190 aa13.87□□□□□ -0.19
LTBR-215ENST00000546296 OR4S1Q8NGB4 309 aa13.87□□□□□ -0.19
LTBR-215ENST00000546296 OR51T1Q8NGJ9 327 aa13.87□□□□□ -0.19
LTBR-215ENST00000546296 UPRTQ96BW1 309 aa13.87□□□□□ -0.19
LTBR-215ENST00000546296 ZNF696Q9H7X3 374 aa13.87□□□□□ -0.19
LTBR-215ENST00000546296 NUP50Q9UKX7 468 aa13.87□□□□□ -0.19
LTBR-215ENST00000546296 AK6Q9Y3D8 172 aaKnown RBP13.87□□□□□ -0.19
LTBR-215ENST00000546296 KPTNQ9Y664 436 aa13.87□□□□□ -0.19
LTBR-215ENST00000546296 MXRA5Q9NR99 2828 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 IGHV3OR16-10A0A075B7F0 116 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 MGST3O14880 152 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 EPHA1P21709 976 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 GALP22466 123 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 MYL9P24844 172 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 TMEM200BQ69YZ2 307 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 C22orf42Q6IC83 251 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 CD200R1LQ6Q8B3 271 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 LYPD6Q86Y78 171 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 KIR3DL3Q8N743 410 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 POM121Q96HA1 1249 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 SIRPDQ9H106 197 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 OCEL1Q9H607 264 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 PLGRKTQ9HBL7 147 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 GHRLQ9UBU3 117 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 STUB1Q9UNE7 303 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 SSR3Q9UNL2 185 aa13.86□□□□□ -0.19
LTBR-215ENST00000546296 A0A1W2PP11 408 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 FUOMA2VDF0 154 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 SLC33A1O00400 549 aaPredicted RBP13.85□□□□□ -0.19
LTBR-215ENST00000546296 PDCD5O14737 125 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 CRTAPO75718 401 aaPredicted RBP13.85□□□□□ -0.19
LTBR-215ENST00000546296 OR7C1O76099 320 aaPredicted RBP13.85□□□□□ -0.19
LTBR-215ENST00000546296 UBBP0CG47 229 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 FPR2P25090 351 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 LMO1P25800 156 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 OR3A1P47881 315 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 PSMD7P51665 324 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 RBM11P57052 281 aaKnown RBP13.85□□□□□ -0.19
LTBR-215ENST00000546296 PAN3Q58A45 887 aaKnown RBP13.85□□□□□ -0.19
LTBR-215ENST00000546296 KLF17Q5JT82 389 aaPredicted RBP13.85□□□□□ -0.19
LTBR-215ENST00000546296 C1orf100Q5SVJ3 147 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 GPR157Q5UAW9 335 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 VMO1Q7Z5L0 202 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 LHX4Q969G2 390 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 MRPS24Q96EL2 167 aaKnown RBP13.85□□□□□ -0.19
LTBR-215ENST00000546296 TBX15Q96SF7 602 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 PPA2Q9H2U2 334 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 BANF2Q9H503 90 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 ING3Q9NXR8 418 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 WNK2Q9Y3S1 2297 aa13.85□□□□□ -0.19
LTBR-215ENST00000546296 SVEP1Q4LDE5 3571 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 TRAV1-2A0A0B4J238 106 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 TRAV40A0A0B4J280 105 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 hCG_1809904A0A1W2PP81 198 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 A0A1W2PPE2 198 aa13.84□□□□□ -0.19
LTBR-215ENST00000546296 A0A1W2PR64 198 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms