RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 DCDC2BA2VCK2 349 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 PPP5D1E7EU14 171 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 KIR2DS3K7RE56 304 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 M0R296 226 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 TNFSF13O75888 250 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 TNFP01375 233 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 ZNF708P17019 499 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 ZNF41P51814 821 aaPredicted RBP6.89□□□□□ -1.31
UBR1-202ENST00000546274 EFNA3P52797 238 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 UCP2P55851 309 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 HIST1H3AP68431 136 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 HHEXQ03014 270 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 PMPCAQ10713 525 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 KIR2DS5Q14953 304 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 FDX2Q6P4F2 183 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 DPPA3Q6W0C5 159 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 TMEM156Q8N614 296 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 PPP1R14AQ96A00 147 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 LOXL4Q96JB6 756 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 DCBLD2Q96PD2 775 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 OR6C1Q96RD1 312 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 TXN2Q99757 166 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 GPR35Q9HC97 309 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 CAPZBP47756 277 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 TMEM183BQ1AE95 376 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 C1QL3Q5VWW1 255 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 MRPL52Q86TS9 123 aaKnown RBP6.89□□□□□ -1.31
UBR1-202ENST00000546274 MCEMP1Q8IX19 187 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 TMEM256Q8N2U0 113 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 ZDHHC22Q8N966 263 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 SMRP1Q8NCR6 262 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 OTOSQ8NHW6 89 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 ZNF596Q8TC21 504 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 PTPMT1Q8WUK0 201 aaPredicted RBP6.89□□□□□ -1.31
UBR1-202ENST00000546274 APH1AQ96BI3 265 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 RPUSD4Q96CM3 377 aaKnown RBP6.89□□□□□ -1.31
UBR1-202ENST00000546274 SLC41A2Q96JW4 573 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 ZNF319Q9P2F9 582 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 BGLAPP02818 100 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 GAPDHP04406 335 aaKnown RBP6.89□□□□□ -1.31
UBR1-202ENST00000546274 CXCR1P25024 350 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 DUSP3P51452 185 aaPredicted RBP6.89□□□□□ -1.31
UBR1-202ENST00000546274 UBE2G2P60604 165 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 RPL23AP62750 156 aaKnown RBP6.89□□□□□ -1.31
UBR1-202ENST00000546274 SSBP1Q04837 148 aaKnown RBP6.89□□□□□ -1.31
UBR1-202ENST00000546274 FZD2Q14332 565 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 TMEM128Q5BJH2 165 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 GLYATL3Q5SZD4 288 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 TPTE2P1Q5T6R2 138 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 PTCRAQ6ISU1 281 aaPredicted RBP6.89□□□□□ -1.31
UBR1-202ENST00000546274 LFNGQ8NES3 379 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 OR10S1Q8NGN2 331 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 ZCCHC14Q8WYQ9 949 aaKnown RBP6.89□□□□□ -1.31
UBR1-202ENST00000546274 FAM46BQ96A09 425 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 FOXN4Q96NZ1 517 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 NXF5Q9H1B4 397 aaKnown RBP6.89□□□□□ -1.31
UBR1-202ENST00000546274 SRD5A3Q9H8P0 318 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 WFDC1Q9HC57 220 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 GPR27Q9NS67 375 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 CKLFQ9UBR5 152 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 OSGIN2Q9Y236 505 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 HS3ST3A1Q9Y663 406 aa6.89□□□□□ -1.31
UBR1-202ENST00000546274 BLACEA4D250 179 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 XRCC2O43543 280 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 UTS2O95399 124 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 BPNT1O95861 308 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 SEC11BP0C7V7 166 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 GABRG2P18507 467 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 LTBRP36941 435 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 ZNF117Q03924 483 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 MFGE8Q08431 387 aaPredicted RBP6.88□□□□□ -1.31
UBR1-202ENST00000546274 C1orf61Q13536 156 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 WDR73Q6P4I2 378 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 LINC01551Q86U37 167 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 ADOQ96SZ5 270 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 PRRX2Q99811 253 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 C20orf144Q9BQM9 153 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 MEGF9Q9H1U4 602 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 RAB18Q9NP72 206 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 OR6C3Q9NZP0 311 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 CLEC1BQ9P126 229 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 SLC22A13Q9Y226 551 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 RNF115Q9Y4L5 304 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 EXPH5Q8NEV8 1989 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 KIF26BQ2KJY2 2108 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 SPTY2D1-AS1A0A0U1RR47 76 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 SLC17A2O00624 439 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 NUPR1O60356 82 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 KNG1P01042 644 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 PSG1P11464 419 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 TAF9Q16594 264 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 MEP1BQ16820 701 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 Q6ZN92 141 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 NKAIN3Q8N8D7 197 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 POC1AQ8NBT0 407 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 ST6GALNAC3Q8NDV1 305 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 RNF128Q8TEB7 428 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 AQP3Q92482 292 aa6.88□□□□□ -1.31
UBR1-202ENST00000546274 PINX1Q96BK5 328 aaKnown RBP6.88□□□□□ -1.31
UBR1-202ENST00000546274 C8orf44Q96CB5 159 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms