RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 NUP50Q9UKX7 468 aa14.48□□□□□ -0.09
CD9-211ENST00000546073 ST3GAL6Q9Y274 331 aa14.48□□□□□ -0.09
CD9-211ENST00000546073 IGKV1-12A0A0C4DH73 117 aa14.47□□□□□ -0.09
CD9-211ENST00000546073 F8VVB4 439 aa14.47□□□□□ -0.09
CD9-211ENST00000546073 F8VWA3 439 aa14.47□□□□□ -0.09
CD9-211ENST00000546073 CRTAPO75718 401 aaPredicted RBP14.47□□□□□ -0.09
CD9-211ENST00000546073 OR2H2O95918 312 aa14.47□□□□□ -0.09
CD9-211ENST00000546073 IGKV1D-12P01611 117 aa14.47□□□□□ -0.09
CD9-211ENST00000546073 AMY2BP19961 511 aa14.47□□□□□ -0.09
CD9-211ENST00000546073 GUCA2AQ02747 115 aa14.47□□□□□ -0.09
CD9-211ENST00000546073 ASCL4Q6XD76 172 aa14.47□□□□□ -0.09
CD9-211ENST00000546073 OR10K1Q8NGX5 313 aa14.47□□□□□ -0.09
CD9-211ENST00000546073 NEK7Q8TDX7 302 aa14.47□□□□□ -0.09
CD9-211ENST00000546073 A0A1B0GW55 424 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 TRDV1A0A1B0GX56 115 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 M0R1W7 72 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 PIN1P1O15428 100 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 OR7C1O76099 320 aaPredicted RBP14.46□□□□□ -0.09
CD9-211ENST00000546073 TFF1P04155 84 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 DUX4L2P0CJ85 424 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 DUX4L3P0CJ86 424 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 DUX4L4P0CJ87 422 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 DUX4L5P0CJ88 424 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 DUX4L6P0CJ89 424 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 DUX4L7P0CJ90 424 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 SELLP14151 372 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 ADRA2CP18825 462 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 EPHA1P21709 976 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 HTR2CP28335 458 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 KCNJ3P48549 501 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 FABP5Q01469 135 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 MEF2CQ06413 473 aaPredicted RBP14.46□□□□□ -0.09
CD9-211ENST00000546073 INSL4Q14641 139 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 MPV17LQ2QL34 196 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 PAN3Q58A45 887 aaKnown RBP14.46□□□□□ -0.09
CD9-211ENST00000546073 NCR3LG1Q68D85 454 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 DUX4L9Q6RFH8 374 aaPredicted RBP14.46□□□□□ -0.09
CD9-211ENST00000546073 C1orf122Q6ZSJ8 110 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 LY6G5BQ8NDX9 201 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 OR4M1Q8NGD0 313 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 OR6M1Q8NGM8 313 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 C8orf46Q8TAG6 207 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 UPRTQ96BW1 309 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 SUCNR1Q9BXA5 334 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 METTL8Q9H825 291 aaKnown RBP14.46□□□□□ -0.09
CD9-211ENST00000546073 DUX4Q9UBX2 424 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 STUB1Q9UNE7 303 aa14.46□□□□□ -0.09
CD9-211ENST00000546073 VPS13CQ709C8 3753 aa14.46□□□□□ -0.1
CD9-211ENST00000546073 TRGV10A0A0A0MS01 117 aa14.45□□□□□ -0.1
CD9-211ENST00000546073 SC5DO75845 299 aa14.45□□□□□ -0.1
CD9-211ENST00000546073 PAX2Q02962 417 aa14.45□□□□□ -0.1
CD9-211ENST00000546073 RBM39Q14498 530 aaKnown RBP14.45□□□□□ -0.1
CD9-211ENST00000546073 FAM189A2Q15884 450 aa14.45□□□□□ -0.1
CD9-211ENST00000546073 ATAD3CQ5T2N8 411 aa14.45□□□□□ -0.1
CD9-211ENST00000546073 FAM27D1Q5T7N8 215 aa14.45□□□□□ -0.1
CD9-211ENST00000546073 ASPHD2Q6ICH7 369 aa14.45□□□□□ -0.1
CD9-211ENST00000546073 OR51T1Q8NGJ9 327 aa14.45□□□□□ -0.1
CD9-211ENST00000546073 KCNG3Q8TAE7 436 aa14.45□□□□□ -0.1
CD9-211ENST00000546073 CHST6Q9GZX3 395 aa14.45□□□□□ -0.1
CD9-211ENST00000546073 HEXA-AS1Q9H8Q6 139 aa14.45□□□□□ -0.1
CD9-211ENST00000546073 V9GY05 133 aa14.45□□□□□ -0.1
CD9-211ENST00000546073 TEP1Q99973 2627 aaKnown RBP14.44□□□□□ -0.1
CD9-211ENST00000546073 TRAV40A0A0B4J280 105 aa14.44□□□□□ -0.1
CD9-211ENST00000546073 MCRIP1C9JLW8 97 aa14.44□□□□□ -0.1
CD9-211ENST00000546073 TCF21O43680 179 aa14.44□□□□□ -0.1
CD9-211ENST00000546073 BPNT1O95861 308 aa14.44□□□□□ -0.1
CD9-211ENST00000546073 LMO1P25800 156 aa14.44□□□□□ -0.1
CD9-211ENST00000546073 ERP29P30040 261 aaKnown RBP14.44□□□□□ -0.1
CD9-211ENST00000546073 RAB11BQ15907 218 aa14.44□□□□□ -0.1
CD9-211ENST00000546073 SSX1Q16384 188 aa14.44□□□□□ -0.1
CD9-211ENST00000546073 SYT6Q5T7P8 510 aaPredicted RBP14.44□□□□□ -0.1
CD9-211ENST00000546073 TMEM91Q6ZNR0 172 aa14.44□□□□□ -0.1
CD9-211ENST00000546073 ZNF565Q8N9K5 539 aa14.44□□□□□ -0.1
CD9-211ENST00000546073 URM1Q9BTM9 101 aaKnown RBP14.44□□□□□ -0.1
CD9-211ENST00000546073 SELENOIQ9C0D9 397 aa14.44□□□□□ -0.1
CD9-211ENST00000546073 GAL3ST2Q9H3Q3 398 aa14.44□□□□□ -0.1
CD9-211ENST00000546073 ZNF696Q9H7X3 374 aa14.44□□□□□ -0.1
CD9-211ENST00000546073 OR6C3Q9NZP0 311 aa14.44□□□□□ -0.1
CD9-211ENST00000546073 OPN4Q9UHM6 478 aa14.44□□□□□ -0.1
CD9-211ENST00000546073 SF3B6Q9Y3B4 125 aaKnown RBP14.44□□□□□ -0.1
CD9-211ENST00000546073 FAM96BQ9Y3D0 163 aa14.44□□□□□ -0.1
CD9-211ENST00000546073 AK6Q9Y3D8 172 aaKnown RBP14.44□□□□□ -0.1
CD9-211ENST00000546073 TRAV1-2A0A0B4J238 106 aa14.43□□□□□ -0.1
CD9-211ENST00000546073 A0A0G2JK05 382 aa14.43□□□□□ -0.1
CD9-211ENST00000546073 ARSBP15848 533 aa14.43□□□□□ -0.1
CD9-211ENST00000546073 RBM11P57052 281 aaKnown RBP14.43□□□□□ -0.1
CD9-211ENST00000546073 ERVFRD-1P60508 538 aa14.43□□□□□ -0.1
CD9-211ENST00000546073 NHLRC3Q5JS37 347 aa14.43□□□□□ -0.1
CD9-211ENST00000546073 KRBOX4Q5JUW0 171 aa14.43□□□□□ -0.1
CD9-211ENST00000546073 C22orf42Q6IC83 251 aa14.43□□□□□ -0.1
CD9-211ENST00000546073 RNF144BQ7Z419 303 aa14.43□□□□□ -0.1
CD9-211ENST00000546073 VMO1Q7Z5L0 202 aa14.43□□□□□ -0.1
CD9-211ENST00000546073 LRRTM1Q86UE6 522 aa14.43□□□□□ -0.1
CD9-211ENST00000546073 Q8NFD4 153 aa14.43□□□□□ -0.1
CD9-211ENST00000546073 LHX4Q969G2 390 aa14.43□□□□□ -0.1
CD9-211ENST00000546073 ZDHHC16Q969W1 377 aa14.43□□□□□ -0.1
CD9-211ENST00000546073 KCTD7Q96MP8 289 aa14.43□□□□□ -0.1
CD9-211ENST00000546073 PPA2Q9H2U2 334 aa14.43□□□□□ -0.1
CD9-211ENST00000546073 RAB9BQ9NP90 201 aa14.43□□□□□ -0.1
CD9-211ENST00000546073 IL36RNQ9UBH0 155 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms