RNA–Protein interactions for RNA: ENST00000545934.5

CPSF7-225, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-225ENST00000545934 FAM90A16PA6NEW6 464 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 FAM90A20PA6NIJ5 464 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 AQP12BA6NM10 295 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 FAM90A9PA6NNJ1 464 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 FAM90A12PA8MX19 464 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 FAM90A5PA8MXJ8 464 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 OOSP1A8MZH6 123 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 ZNF670-ZNF695F2Z2N8 137 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 FAM90A15PP0C7V4 464 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 FAM90A13PP0C7W8 464 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 FAM90A14PP0C7W9 464 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 FAM90A24PP0C7X0 464 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 BCL3P20749 454 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 LMO1P25800 156 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 CEACAM3P40198 252 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 MYCNOSP40205 109 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 CDC42P60953 191 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 PTGES3Q15185 160 aaKnown RBP13.19□□□□□ -0.3
CPSF7-225ENST00000545934 NKAPLQ5M9Q1 402 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 UTF1Q5T230 341 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 NXNL2Q5VZ03 156 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 C18orf65Q6ZTR6 163 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 OR2W3Q7Z3T1 314 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 RNF144BQ7Z419 303 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 TRAPPC6BQ86SZ2 158 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 AQP12AQ8IXF9 295 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 CCDC54Q8NEL0 328 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 DNAAF1Q8NEP3 725 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 DNAJC9Q8WXX5 260 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 CREB3L1Q96BA8 519 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 BORCS8Q96FH0 119 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 LRGUKQ96M69 825 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 ZFP57Q9NU63 452 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 MOB4Q9Y3A3 225 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 LSM4Q9Y4Z0 139 aaKnown RBP13.19□□□□□ -0.3
CPSF7-225ENST00000545934 HSPE1-MOB4S4R3N1 261 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 U3KQK5 164 aa13.19□□□□□ -0.3
CPSF7-225ENST00000545934 TRGV10A0A0A0MS01 117 aa13.18□□□□□ -0.3
CPSF7-225ENST00000545934 FAM172BPA6NC97 362 aa13.18□□□□□ -0.3
CPSF7-225ENST00000545934 SYT7O43581 403 aa13.18□□□□□ -0.3
CPSF7-225ENST00000545934 CCDC159P0C7I6 412 aa13.18□□□□□ -0.3
CPSF7-225ENST00000545934 HOXB6P17509 224 aaKnown RBP13.18□□□□□ -0.3
CPSF7-225ENST00000545934 DGCR2P98153 550 aa13.18□□□□□ -0.3
CPSF7-225ENST00000545934 ODF4Q2M2E3 257 aa13.18□□□□□ -0.3
CPSF7-225ENST00000545934 C9orf152Q5JTZ5 239 aa13.18□□□□□ -0.3
CPSF7-225ENST00000545934 FAHD1Q6P587 224 aa13.18□□□□□ -0.3
CPSF7-225ENST00000545934 C8orf86Q6ZUL3 223 aa13.18□□□□□ -0.3
CPSF7-225ENST00000545934 ZNF329Q86UD4 541 aa13.18□□□□□ -0.3
CPSF7-225ENST00000545934 THNSL2Q86YJ6 484 aa13.18□□□□□ -0.3
CPSF7-225ENST00000545934 C10orf35Q96D05 121 aa13.18□□□□□ -0.3
CPSF7-225ENST00000545934 NSL1Q96IY1 281 aa13.18□□□□□ -0.3
CPSF7-225ENST00000545934 HMG20AQ9NP66 347 aa13.18□□□□□ -0.3
CPSF7-225ENST00000545934 ZMAT5Q9UDW3 170 aaKnown RBP13.18□□□□□ -0.3
CPSF7-225ENST00000545934 LYSTQ99698 3801 aa13.18□□□□□ -0.3
CPSF7-225ENST00000545934 IGKV1-9A0A0C4DH69 117 aa13.17□□□□□ -0.3
CPSF7-225ENST00000545934 H3BSH0 61 aa13.17□□□□□ -0.3
CPSF7-225ENST00000545934 M0R129 80 aa13.17□□□□□ -0.3
CPSF7-225ENST00000545934 SIRPB1O00241 398 aa13.17□□□□□ -0.3
CPSF7-225ENST00000545934 RPP14O95059 124 aaKnown RBP13.17□□□□□ -0.3
CPSF7-225ENST00000545934 CSN2P05814 226 aa13.17□□□□□ -0.3
CPSF7-225ENST00000545934 PRKACAP17612 351 aa13.17□□□□□ -0.3
CPSF7-225ENST00000545934 OR3A4PP47883 348 aa13.17□□□□□ -0.3
CPSF7-225ENST00000545934 RBP2P50120 134 aa13.17□□□□□ -0.3
CPSF7-225ENST00000545934 CCDC144NLQ6NUI1 221 aa13.17□□□□□ -0.3
CPSF7-225ENST00000545934 PRSS35Q8N3Z0 413 aa13.17□□□□□ -0.3
CPSF7-225ENST00000545934 CHPT1Q8WUD6 406 aa13.17□□□□□ -0.3
CPSF7-225ENST00000545934 PP6455Q8WZ26 134 aa13.17□□□□□ -0.3
CPSF7-225ENST00000545934 CCDC124Q96CT7 223 aaKnown RBP13.17□□□□□ -0.3
CPSF7-225ENST00000545934 RAMP3O60896 148 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 OR2H2O95918 312 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 SERPINA3P01011 423 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 KRT8P05787 483 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 FAM106CPP0CH98 169 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 T-ENOLP0DO92 83 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 CALCBP10092 127 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 MNDAP41218 407 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 GLIPR1P48060 266 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 DAPP51397 102 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 ATP1B3P54709 279 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 AESQ08117 197 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 C17orf58Q2M2W7 97 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 TCEANCQ8N8B7 351 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 C5orf56Q8N8D9 126 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 YIPF7Q8N8F6 280 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 TMEM163Q8TC26 289 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 RNF166Q96A37 237 aaPredicted RBP13.16□□□□□ -0.3
CPSF7-225ENST00000545934 NRBF2Q96F24 287 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 NOL4LQ96MY1 436 aaPredicted RBP13.16□□□□□ -0.3
CPSF7-225ENST00000545934 COMMD4Q9H0A8 199 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 GLS2Q9UI32 602 aa13.16□□□□□ -0.3
CPSF7-225ENST00000545934 BIRC6Q9NR09 4857 aa13.15□□□□□ -0.3
CPSF7-225ENST00000545934 IGKV1-12A0A0C4DH73 117 aa13.15□□□□□ -0.3
CPSF7-225ENST00000545934 ODAMA1E959 279 aa13.15□□□□□ -0.3
CPSF7-225ENST00000545934 FUOMA2VDF0 154 aa13.15□□□□□ -0.3
CPSF7-225ENST00000545934 TOR1AO14656 332 aa13.15□□□□□ -0.3
CPSF7-225ENST00000545934 IGKV1D-12P01611 117 aa13.15□□□□□ -0.3
CPSF7-225ENST00000545934 CGB3P0DN86 165 aa13.15□□□□□ -0.3
CPSF7-225ENST00000545934 CGB7P0DN87 165 aa13.15□□□□□ -0.3
CPSF7-225ENST00000545934 PTGFRP43088 359 aa13.15□□□□□ -0.3
CPSF7-225ENST00000545934 PRRX1P54821 245 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms