RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 KLRD1Q13241 179 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 OR2G6Q5TZ20 316 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 ELP2Q6IA86 826 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 C17orf107Q6ZR85 190 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 DTX3Q8N9I9 347 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 BEND2Q8NDZ0 799 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 RFT1Q96AA3 541 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 FOXRED1Q96CU9 486 aaPredicted RBP9.65□□□□□ -0.86
HDAC4-216ENST00000544989 CHIAQ9BZP6 476 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 RAB18Q9NP72 206 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 TMEM138Q9NPI0 162 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 PSORS1C1Q9UIG5 152 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 VPREB3Q9UKI3 123 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 ERGIC3Q9Y282 383 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 GSTK1Q9Y2Q3 226 aa9.65□□□□□ -0.86
HDAC4-216ENST00000544989 UBE2J1Q9Y385 318 aaPredicted RBP9.65□□□□□ -0.86
HDAC4-216ENST00000544989 TMEM82A0PJX8 343 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 OR2H2O95918 312 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 IGHV4-59P01825 116 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 CSN2P05814 226 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 GNAO1P09471 354 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 MAPK3P27361 379 aaPredicted RBP9.64□□□□□ -0.87
HDAC4-216ENST00000544989 SOX2P48431 317 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 RAG2P55895 527 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 ZP1P60852 638 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 BDH1Q02338 343 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 EDDM3AQ14507 147 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 ZNF273Q14593 569 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 IL13RA2Q14627 380 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 RSU1Q15404 277 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 Q499Y3 187 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 RNLSQ5VYX0 342 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 DMKNQ6E0U4 476 aaPredicted RBP9.64□□□□□ -0.87
HDAC4-216ENST00000544989 LIAT1Q6ZQX7 453 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 SATL1Q86VE3 508 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 BPIFB6Q8NFQ5 453 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 OR5D18Q8NGL1 313 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 GHSRQ92847 366 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 MYDGFQ969H8 173 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 SPACA5Q96QH8 159 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 S100A13Q99584 98 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 SLITRK2Q9H156 845 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 MEGF9Q9H1U4 602 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 GAL3ST2Q9H3Q3 398 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 SCN3BQ9NY72 215 aa9.64□□□□□ -0.87
HDAC4-216ENST00000544989 TBL2Q9Y4P3 447 aaKnown RBP9.64□□□□□ -0.87
HDAC4-216ENST00000544989 TRGV10A0A0A0MS01 117 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 IGKV1-12A0A0C4DH73 117 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 TRBV5-5A0A0J9YX44 114 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 ANKRD65E5RJM6 399 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 H3BUI4 141 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 DEGS1O15121 323 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 GPR137BO60478 399 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 PSPNO60542 156 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 ZNF780AO75290 641 aaPredicted RBP9.63□□□□□ -0.87
HDAC4-216ENST00000544989 GPX5O75715 221 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 IGKV1D-12P01611 117 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 IGHV1-8P0DP01 117 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 ZNF44P15621 663 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 CCL3L1P16619 93 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 BDKRB2P30411 391 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 TGFBR2P37173 567 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 OR3A1P47881 315 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 KCNJ3P48549 501 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 HSPA13P48723 471 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 DLX6P56179 175 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 P2RX3P56373 397 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 WNT4P56705 351 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 RIPK1Q13546 671 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 XAF1Q6GPH4 301 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 DHRS7BQ6IAN0 325 aaPredicted RBP9.63□□□□□ -0.87
HDAC4-216ENST00000544989 OR52W1Q6IF63 320 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 HCP5Q6MZN7 132 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 AHSA2Q719I0 299 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 LINC00596Q86U02 117 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 C11orf42Q8N5U0 333 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 ZNF485Q8NCK3 441 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 TNFAIP8L1Q8WVP5 186 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 RGP1Q92546 391 aaPredicted RBP9.63□□□□□ -0.87
HDAC4-216ENST00000544989 MND1Q9BWT6 205 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 METTL9Q9H1A3 318 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 NCOR1P1Q9H4R4 102 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 TNFRSF19Q9NS68 423 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 TAS2R4Q9NYW5 299 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 TAS2R3Q9NYW6 316 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 IL36GQ9NZH8 169 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 CLEC2DQ9UHP7 191 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 SESN1Q9Y6P5 492 aa9.63□□□□□ -0.87
HDAC4-216ENST00000544989 A0A0G2JK05 382 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 A0A1W2PRD5 423 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 A0A1W2PRF3 423 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 A0A1W2PRM7 423 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 SIRPB1O00241 398 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 XPNPEP2O43895 674 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 CLPXO76031 633 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 FSTP19883 344 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 DUSP1P28562 367 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 ZNF93P35789 620 aaPredicted RBP9.62□□□□□ -0.87
HDAC4-216ENST00000544989 PTGFRP43088 359 aa9.62□□□□□ -0.87
HDAC4-216ENST00000544989 SNU13P55769 128 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms