RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 P4HTMQ9NXG6 502 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 LAMP3Q9UQV4 416 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 NPTNQ9Y639 398 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 CCDC187A0A096LP49 1063 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 B4DEV8 164 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 SIRPB1O00241 398 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 CDK2AP1O14519 115 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 CLDN1O95832 211 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 ZBTB25P24278 435 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 H2BFSP57053 126 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 PNRC1Q12796 327 aaPredicted RBP5.08□□□□□ -1.6
VPS50-220ENST00000544910 PABPC1L2AQ5JQF8 200 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 NTNG2Q96CW9 530 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 LPAR5Q9H1C0 372 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 OR51M1Q9H341 326 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 PLEKHF2Q9H8W4 249 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 STARD10Q9Y365 291 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 MYO10Q9HD67 2058 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 C3orf85A0A1B0GTC6 90 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 ACTL6BO94805 426 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 OR2A4O95047 310 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 FGF5P12034 268 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 IGFBP3P17936 291 aaPredicted RBP5.08□□□□□ -1.6
VPS50-220ENST00000544910 ZNF273Q14593 569 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 SLC10A1Q14973 349 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 OR8G1Q15617 311 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 OR8B8Q15620 311 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 NHLRC3Q5JS37 347 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 PMS2CLQ68D20 193 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 TOMM20LQ6UXN7 152 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 OR5M9Q8NGP3 310 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 FAM210BQ96KR6 192 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 OR2A7Q96R45 310 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 PRO1933Q9H354 126 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 ZDHHC11Q9H8X9 412 aa5.08□□□□□ -1.6
VPS50-220ENST00000544910 SH2D1BO14796 132 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 DNPH1O43598 174 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 ADAP1O75689 374 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 OR5AC1P0C628 307 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 CCL4P13236 92 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 HOXB1P14653 301 aaPredicted RBP5.07□□□□□ -1.6
VPS50-220ENST00000544910 RNPS1Q15287 305 aaKnown RBP5.07□□□□□ -1.6
VPS50-220ENST00000544910 FAM24BQ8N5W8 94 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 ZFP62Q8NB50 900 aaPredicted RBP5.07□□□□□ -1.6
VPS50-220ENST00000544910 OR13G1Q8NGZ3 307 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 RXFP4Q8TDU9 374 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 GDF15Q99988 308 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 SIRT7Q9NRC8 400 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 SLC2A8Q9NY64 477 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 ANXA10Q9UJ72 324 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 TCFL5Q9UL49 500 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 POLDIP2Q9Y2S7 368 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 KCNK7Q9Y2U2 307 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 A0A087WV48 116 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 OPN1MWP04001 364 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 CELA2AP08217 269 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 FAM157BP0CG42 384 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 OPN1MW2P0DN77 364 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 OPN1MW3P0DN78 364 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 ZNF25P17030 456 aaPredicted RBP5.07□□□□□ -1.6
VPS50-220ENST00000544910 FHL1Q13642 323 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 OR2A2Q6IF42 318 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 RGS7BPQ6MZT1 257 aaPredicted RBP5.07□□□□□ -1.6
VPS50-220ENST00000544910 ZNF66Q6ZN08 573 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 C1orf210Q8IVY1 113 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 ZNF441Q8N8Z8 693 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 SAP25Q8TEE9 199 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 ZNF385AQ96PM9 386 aaKnown RBP5.07□□□□□ -1.6
VPS50-220ENST00000544910 LIN7CQ9NUP9 197 aaKnown RBP5.07□□□□□ -1.6
VPS50-220ENST00000544910 RASL12Q9NYN1 266 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 PPP1R3CQ9UQK1 317 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 XKRY2A2RUG3 117 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 SLC22A20A6NK97 555 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 PDCD6O75340 191 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 CFDP00746 253 aaPredicted RBP5.07□□□□□ -1.6
VPS50-220ENST00000544910 GRPP07492 148 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 EDN3P14138 238 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 BCL3P20749 454 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 MEOX1P50221 254 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 IL13RA2Q14627 380 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 MIDNQ504T8 468 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 C9orf152Q5JTZ5 239 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 ZNF383Q8NA42 475 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 OR4F5Q8NH21 305 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 OR51H1Q8NH63 302 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 MAFAQ8NHW3 353 aaPredicted RBP5.07□□□□□ -1.6
VPS50-220ENST00000544910 PINX1Q96BK5 328 aaKnown RBP5.07□□□□□ -1.6
VPS50-220ENST00000544910 MS4A10Q96PG2 267 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 OR4F4Q96R69 305 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 GPR35Q9HC97 309 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 TMED3Q9Y3Q3 217 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 DENND4CQ5VZ89 1909 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 A0A1W2PPQ1 181 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 ZNF320A2RRD8 509 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 TNFSF15O95150 251 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 CRYBA1P05813 215 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 COX6A1P12074 109 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 RPL29P47914 159 aaKnown RBP5.07□□□□□ -1.6
VPS50-220ENST00000544910 CCL11P51671 97 aa5.07□□□□□ -1.6
VPS50-220ENST00000544910 PDCD1Q15116 288 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms