RNA–Protein interactions for RNA: ENST00000544750.1

USP28-212, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-212ENST00000544750 OR4P4Q8NGL7 312 aa10.19□□□□□ -0.78
USP28-212ENST00000544750 MCRIP2Q9BUT9 160 aaKnown RBP10.19□□□□□ -0.78
USP28-212ENST00000544750 MOB1AQ9H8S9 216 aa10.19□□□□□ -0.78
USP28-212ENST00000544750 OR14J1Q9UGF5 321 aa10.19□□□□□ -0.78
USP28-212ENST00000544750 OR52A1Q9UKL2 312 aa10.19□□□□□ -0.78
USP28-212ENST00000544750 SLC22A13Q9Y226 551 aa10.19□□□□□ -0.78
USP28-212ENST00000544750 EXOGQ9Y2C4 368 aaKnown RBP10.19□□□□□ -0.78
USP28-212ENST00000544750 METTL15A6NJ78 407 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 CASQ2O14958 399 aaPredicted RBP10.18□□□□□ -0.78
USP28-212ENST00000544750 WBP4O75554 376 aaKnown RBP10.18□□□□□ -0.78
USP28-212ENST00000544750 SULT1C4O75897 302 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 DHRS3O75911 302 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 RPP14O95059 124 aaKnown RBP10.18□□□□□ -0.78
USP28-212ENST00000544750 NXPH2O95156 264 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 ZFPL1O95159 310 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 KRT8P05787 483 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 DBTP11182 482 aaKnown RBP10.18□□□□□ -0.78
USP28-212ENST00000544750 CCL1P22362 96 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 CD24P25063 80 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 HAAOP46952 286 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 RIPPLY1Q0D2K3 151 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 TP53I3Q53FA7 332 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 CASC10Q5T4H9 136 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 BCL2L15Q5TBC7 163 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 OGFRL1Q5TC84 451 aaPredicted RBP10.18□□□□□ -0.78
USP28-212ENST00000544750 PLCXD3Q63HM9 321 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 ZNF573Q86YE8 665 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 OSR2Q8N2R0 312 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 YIPF7Q8N8F6 280 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 LGALS12Q96DT0 336 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 ZNF714Q96N38 554 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 RBM14Q96PK6 669 aaKnown RBP10.18□□□□□ -0.78
USP28-212ENST00000544750 P2RX4Q99571 388 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 ZNF649Q9BS31 505 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 SLC25A33Q9BSK2 321 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 HHLA2Q9UM44 414 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 SNX5Q9Y5X3 404 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 SESN1Q9Y6P5 492 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 V9GYS6 101 aa10.18□□□□□ -0.78
USP28-212ENST00000544750 SORL1Q92673 2214 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 PQLC2LA1A4F0 135 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 SH2D7A6NKC9 451 aaPredicted RBP10.17□□□□□ -0.78
USP28-212ENST00000544750 MMP23AO75900 390 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 OR2F2O95006 317 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 NRASP01111 189 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 LMO1P25800 156 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 ATP6V1E1P36543 226 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 KIR3DL2P43630 455 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 RPL23AP62750 156 aaKnown RBP10.17□□□□□ -0.78
USP28-212ENST00000544750 ADARB1P78563 741 aaKnown RBP10.17□□□□□ -0.78
USP28-212ENST00000544750 DGCR2P98153 550 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 MEF2CQ06413 473 aaPredicted RBP10.17□□□□□ -0.78
USP28-212ENST00000544750 KHDC1LQ5JSQ8 128 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 C18orf65Q6ZTR6 163 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 BATF2Q8N1L9 274 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 PRSS35Q8N3Z0 413 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 PACRGLQ8N7B6 248 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 OR51D1Q8NGF3 324 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 OR14K1Q8NGZ2 314 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 NDNFQ8TB73 568 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 AKR1E2Q96JD6 320 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 CLEC7AQ9BXN2 247 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 TMEM133Q9H2Q1 129 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 AMBNQ9NP70 447 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 GTF2A1LQ9UNN4 478 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 PIGLQ9Y2B2 252 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 MYRFQ9Y2G1 1151 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 POLDIP2Q9Y2S7 368 aa10.17□□□□□ -0.78
USP28-212ENST00000544750 TMEM82A0PJX8 343 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 H3BUI4 141 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 MPZL2O60487 215 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 IGHA1P01876 353 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 HTR1DP28221 377 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 MYCNOSP40205 109 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 EDDM3BP56851 147 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 IL18R1Q13478 541 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 SMN1Q16637 294 aaKnown RBP10.16□□□□□ -0.78
USP28-212ENST00000544750 ZNF691Q5VV52 312 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 COMMD2Q86X83 199 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 OR8H2Q8N162 312 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 ACBD7Q8N6N7 88 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 ZNF676Q8N7Q3 588 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 ASCC1Q8N9N2 400 aaKnown RBP10.16□□□□□ -0.78
USP28-212ENST00000544750 C8orf4Q9NR00 106 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 MRPS18AQ9NVS2 196 aaKnown RBP10.16□□□□□ -0.78
USP28-212ENST00000544750 NKX1-2Q9UD57 310 aaPredicted RBP10.16□□□□□ -0.78
USP28-212ENST00000544750 ZMAT5Q9UDW3 170 aaKnown RBP10.16□□□□□ -0.78
USP28-212ENST00000544750 ENPP5Q9UJA9 477 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 GNG8Q9UK08 70 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 PCDHGB5Q9Y5G0 923 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 LINC00312Q9Y6C7 94 aa10.16□□□□□ -0.78
USP28-212ENST00000544750 HYDINQ4G0P3 5121 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 DAPL1A0PJW8 107 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 DHRS7CA6NNS2 312 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 F8VVB4 439 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 F8VWA3 439 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 RAMP3O60896 148 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 IGLV1-47P01700 117 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 SLC6A1P30531 599 aa10.15□□□□□ -0.78
USP28-212ENST00000544750 NANOS3P60323 173 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms