RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 MTCH1Q9NZJ7 389 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 GHRLQ9UBU3 117 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF222Q9UK12 451 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 GSTK1Q9Y2Q3 226 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 MINOS1-NBL1R4GNA1 71 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 ARHGAP32A7KAX9 2087 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 BIRC6Q9NR09 4857 aa4.61□□□□□ -1.67
CLSTN3-215ENST00000544584 FAM181BA6NEQ2 426 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 E9PQ18 207 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 H3BSH0 61 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 M0QZ24 198 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 ARG1P05089 322 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 CSN2P05814 226 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 MELTFP08582 738 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 UBBP0CG47 229 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 GTF2F2P13984 249 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 GZMHP20718 246 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 BDKRB2P30411 391 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 PTGFRP43088 359 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 PSMD7P51665 324 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 RAG2P55895 527 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 WNT4P56705 351 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 NANOS3P60323 173 aaKnown RBP4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 DEFA6Q01524 100 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 SCN1BQ07699 218 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 DYNC1I2Q13409 638 aaKnown RBP4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 GPR50Q13585 617 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 DOC2BQ14184 412 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 EDDM3AQ14507 147 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 TRAM1Q15629 374 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 FAM189A2Q15884 450 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 LRRC75BQ2VPJ9 315 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 Q499Y3 187 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 ARSJQ5FYB0 599 aaPredicted RBP4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 RNLSQ5VYX0 342 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 GLT8D1Q68CQ7 371 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 TMEM200BQ69YZ2 307 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 ELP2Q6IA86 826 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 PDZD9Q8IXQ8 264 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 CD177Q8N6Q3 437 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 BPIFB6Q8NFQ5 453 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 OR4M1Q8NGD0 313 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 OR4C13Q8NGP0 309 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 NDNFQ8TB73 568 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 CNIH3Q8TBE1 160 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 TNFAIP8L1Q8WVP5 186 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 PHYHIPQ92561 330 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 ADAT3Q96EY9 351 aaPredicted RBP4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 PDCD1LG2Q9BQ51 273 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF747Q9BV97 191 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 CLEC7AQ9BXN2 247 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 NPFFR1Q9GZQ6 430 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 CST11Q9H112 138 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 NCOR1P1Q9H4R4 102 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 TCF7L1Q9HCS4 588 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNRD1Q9P1U0 126 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 VPREB3Q9UKI3 123 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 FOXJ3Q9UPW0 622 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 MYRFQ9Y2G1 1151 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 AMMECR1Q9Y4X0 333 aaPredicted RBP4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 MAB21L2Q9Y586 359 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 SESN1Q9Y6P5 492 aa4.6□□□□□ -1.67
CLSTN3-215ENST00000544584 A0A0U1RQK1 487 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 CLPSL1A2RUU4 121 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 ZNF729A6NN14 1252 aaPredicted RBP4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 C17orf98A8MV24 154 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 LEUTXA8MZ59 168 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 OOSP1A8MZH6 123 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 RNASEK-C17orf49H0YIS7 233 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 F2RL2O00254 374 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 OGG1O15527 345 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 CA11O75493 328 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 WBP4O75554 376 aaKnown RBP4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 CLPXO76031 633 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 OR2H2O95918 312 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 LIMS3P0CW19 117 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 LIMS4P0CW20 117 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 IGHV1-8P0DP01 117 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 CELP19835 753 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 FSTP19883 344 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 BCL3P20749 454 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 ANOS1P23352 680 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 LMO1P25800 156 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 IL3RAP26951 378 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 HTR1DP28221 377 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 GABRA5P31644 462 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 SAA4P35542 130 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 MNDAP41218 407 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 SOX2P48431 317 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 ETV1P50549 477 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 P2RX3P56373 397 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 ELF3P78545 371 aaPredicted RBP4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 ADARB1P78563 741 aaKnown RBP4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 MPV17LQ2QL34 196 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 TUSC1Q2TAM9 212 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 TMEM30BQ3MIR4 351 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 PAN3Q58A45 887 aaKnown RBP4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 DMRTC1Q5HYR2 192 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 KRBOX4Q5JUW0 171 aa4.59□□□□□ -1.67
CLSTN3-215ENST00000544584 DDI2Q5TDH0 399 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms