RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 VDAC1P21796 283 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 CD24P25063 80 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 PRDX2P32119 198 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 DCTDP32321 178 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 SLC15A1P46059 708 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 STX1BP61266 288 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 ISL1P61371 349 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 GRB2P62993 217 aaKnown RBP3.15□□□□□ -1.91
SNHG1-220ENST00000544550 PRKCDQ05655 676 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 MEF2CQ06413 473 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-220ENST00000544550 STX3Q13277 289 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 FHL1Q13642 323 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 TAF13Q15543 124 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 WHAMMP3Q1A5X7 153 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 FGD3Q5JSP0 725 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 LGALS9CQ6DKI2 356 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 SMARCD3Q6STE5 483 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 ZNF66Q6ZN08 573 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 ACP7Q6ZNF0 438 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 GDPD3Q7L5L3 318 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 SLC16A9Q7RTY1 509 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 LINC00346Q8IVM7 164 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 ZDHHC21Q8IVQ6 265 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 MSRB3Q8IXL7 192 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 NRMQ8IXM6 262 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 TIGD4Q8IY51 512 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 ZDHHC23Q8IYP9 409 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 MICU2Q8IYU8 434 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 C5orf56Q8N8D9 126 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 MNS1Q8NEH6 495 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 OR1N2Q8NGR9 330 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 OR13C2Q8NGS9 318 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 UBLCP1Q8WVY7 318 aaPredicted RBP3.15□□□□□ -1.91
SNHG1-220ENST00000544550 OR5P3Q8WZ94 311 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 REEP6Q96HR9 211 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 RNF170Q96K19 258 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 UBE2E2Q96LR5 201 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 PRRC1Q96M27 445 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 OR4C12Q96R67 309 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 SORT1Q99523 831 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 NRIP2Q9BQI9 281 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 TXLNGYQ9BZA5 131 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 NSRP1Q9H0G5 558 aaKnown RBP3.15□□□□□ -1.91
SNHG1-220ENST00000544550 OR51J1Q9H342 316 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 VIPAS39Q9H9C1 493 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 NRIP3Q9NQ35 241 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 HHLA2Q9UM44 414 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 B9D1Q9UPM9 204 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 TMEM5Q9Y2B1 443 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 COX11Q9Y6N1 276 aa3.15□□□□□ -1.91
SNHG1-220ENST00000544550 TRBV5-3A0A0A0MS03 114 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 ARRDC5A6NEK1 342 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 CXorf65A6NEN9 183 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 C12orf77C9JDV5 145 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 ZNF878C9JN71 531 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 K7N7A8 449 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 SOCS2O14508 198 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 TOR1AO14656 332 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 TSPAN4O14817 238 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 TXNDC12O95881 172 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 NUDT3O95989 172 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 IGHG4P01861 327 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 TMEM11P17152 192 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 HSD11B1P28845 292 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 OR1E2P47887 323 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 MRPL19P49406 292 aaKnown RBP3.14□□□□□ -1.91
SNHG1-220ENST00000544550 PRKXP51817 358 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 PRRX1P54821 245 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 EDDM3BP56851 147 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 GNG3P63215 75 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 RUNX1Q01196 453 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 MFGE8Q08431 387 aaPredicted RBP3.14□□□□□ -1.91
SNHG1-220ENST00000544550 PRDX4Q13162 271 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 EIF2B1Q14232 305 aaKnown RBP3.14□□□□□ -1.91
SNHG1-220ENST00000544550 TRAM2Q15035 370 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 KRTAP15-1Q3LI76 137 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 LCN1P1Q5VSP4 162 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 ZNF730Q6ZMV8 503 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 DPY19L2P2Q6ZN68 376 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 MBOAT2Q6ZWT7 520 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 RRM2BQ7LG56 351 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 GTSCR1Q86UQ5 136 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 OFCC1Q8IZS5 231 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 ABHD12Q8N2K0 398 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 CD177Q8N6Q3 437 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 TMEM217Q8N7C4 229 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 FAM86B1Q8N7N1 296 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 EIF1ADQ8N9N8 165 aaKnown RBP3.14□□□□□ -1.91
SNHG1-220ENST00000544550 POC1AQ8NBT0 407 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 OR9I1Q8NGQ6 314 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 TSEN15Q8WW01 171 aaKnown RBP3.14□□□□□ -1.91
SNHG1-220ENST00000544550 ITFG2Q969R8 447 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 TAMM41Q96BW9 452 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 SPDL1Q96EA4 605 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 PKNOX2Q96KN3 472 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 OR8B4Q96RC9 309 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 CHCHD6Q9BRQ6 235 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 FNDC11Q9BVV2 318 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 C20orf27Q9GZN8 174 aa3.14□□□□□ -1.91
SNHG1-220ENST00000544550 HIPK2Q9H2X6 1198 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 96.3 ms