RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 ZNF737O75373 536 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 CRTAPO75718 401 aaPredicted RBP11.3□□□□□ -0.6
SP140-213ENST00000543928 BPNT1O95861 308 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 OR2H2O95918 312 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 CLEC2LP0C7M8 214 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 ZNF44P15621 663 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 MGMTP16455 207 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 NDUFB7P17568 137 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 DVL1P1P54792 670 aaPredicted RBP11.3□□□□□ -0.6
SP140-213ENST00000543928 CLDN12P56749 244 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 RBM11P57052 281 aaKnown RBP11.3□□□□□ -0.6
SP140-213ENST00000543928 IL13RA2Q14627 380 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 PDCD1Q15116 288 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 NHLRC3Q5JS37 347 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 GPR107Q5VW38 600 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 OR10K2Q6IF99 312 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 Q6P435 159 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 SLC16A12Q6ZSM3 486 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 ANKRD13BQ86YJ7 626 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 TMEM104Q8NE00 496 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 FAM46BQ96A09 425 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 NAA50Q9GZZ1 169 aaKnown RBP11.3□□□□□ -0.6
SP140-213ENST00000543928 CST11Q9H112 138 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 BANF2Q9H503 90 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 MMP26Q9NRE1 261 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 HIF1ANQ9NWT6 349 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 STEAP1Q9UHE8 339 aa11.3□□□□□ -0.6
SP140-213ENST00000543928 POLR3KQ9Y2Y1 108 aaPredicted RBP11.3□□□□□ -0.6
SP140-213ENST00000543928 LOC105371242A0A075B767 164 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 NOTOA8MTQ0 251 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 C22orf46C9J442 243 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 K7N7A8 449 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 AIPO00170 330 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 GEMIN2O14893 280 aaKnown RBP11.29□□□□□ -0.6
SP140-213ENST00000543928 MPIG6BO95866 241 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 TK1P04183 234 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 VSIG8P0DPA2 414 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 ARSBP15848 533 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 GABRR1P24046 479 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 CFPP27918 469 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 CAV3P56539 151 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 VBP1P61758 197 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 NCS1P62166 190 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 CD276Q5ZPR3 534 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 Q71RC1 249 aaPredicted RBP11.29□□□□□ -0.6
SP140-213ENST00000543928 BTN2A1Q7KYR7 527 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 H1FXQ92522 213 aaKnown RBP11.29□□□□□ -0.6
SP140-213ENST00000543928 FAM3DQ96BQ1 224 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 MRPS24Q96EL2 167 aaKnown RBP11.29□□□□□ -0.6
SP140-213ENST00000543928 SNX22Q96L94 193 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 SELENOIQ9C0D9 397 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 FAM234AQ9H0X4 552 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 YAE1D1Q9NRH1 226 aa11.29□□□□□ -0.6
SP140-213ENST00000543928 TEP1Q99973 2627 aaKnown RBP11.29□□□□□ -0.6
SP140-213ENST00000543928 PPIAL4CA0A0B4J2A2 164 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 TMEM14DPA8MWL7 114 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 SLC33A1O00400 549 aaPredicted RBP11.28□□□□□ -0.6
SP140-213ENST00000543928 PSPNO60542 156 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 OR7C1O76099 320 aaPredicted RBP11.28□□□□□ -0.6
SP140-213ENST00000543928 GABARAPO95166 117 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 ECDO95905 644 aaPredicted RBP11.28□□□□□ -0.6
SP140-213ENST00000543928 SLC2A2P11168 524 aaPredicted RBP11.28□□□□□ -0.6
SP140-213ENST00000543928 LMO1P25800 156 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 RANBP1P43487 201 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 QRFPP83859 136 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 PAX2Q02962 417 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 UNC119Q13432 240 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 TAF9Q16594 264 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 CTF1Q16619 201 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 C11orf91Q3C1V1 193 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 SFXN4Q6P4A7 337 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 METAP1DQ6UB28 335 aaPredicted RBP11.28□□□□□ -0.6
SP140-213ENST00000543928 C17orf107Q6ZR85 190 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 LINC00596Q86U02 117 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 OR8H2Q8N162 312 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 CHST4Q8NCG5 386 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 OR51D1Q8NGF3 324 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 KCNG3Q8TAE7 436 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 RAB40AQ8WXH6 277 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 NUDT16L1Q9BRJ7 211 aaKnown RBP11.28□□□□□ -0.6
SP140-213ENST00000543928 CHST6Q9GZX3 395 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 SHARPINQ9H0F6 387 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 ZNF581Q9P0T4 197 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 RPUSD1Q9UJJ7 312 aaKnown RBP11.28□□□□□ -0.6
SP140-213ENST00000543928 KCNS2Q9ULS6 477 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 MTORP42345 2549 aa11.28□□□□□ -0.6
SP140-213ENST00000543928 SONP18583 2426 aaKnown RBP11.27□□□□□ -0.6
SP140-213ENST00000543928 HIVEP2P31629 2446 aa11.27□□□□□ -0.6
SP140-213ENST00000543928 A0A0B4J203 849 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 TRAV24A0A0B4J272 114 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 IGHV2-70DA0A0C4DH43 119 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 A0A0G2JMP0 313 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 A0A0X1KG70 313 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 A8MV72 311 aaPredicted RBP11.27□□□□□ -0.61
SP140-213ENST00000543928 ENSAO43768 121 aaKnown RBP11.27□□□□□ -0.61
SP140-213ENST00000543928 RPS19P39019 145 aaKnown RBP11.27□□□□□ -0.61
SP140-213ENST00000543928 OR3A1P47881 315 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 SERPINB10P48595 397 aa11.27□□□□□ -0.61
SP140-213ENST00000543928 RPS27AP62979 156 aaKnown RBP11.27□□□□□ -0.61
SP140-213ENST00000543928 GRK1Q15835 563 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms