RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 TCF24Q7RTU0 167 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 ZNF605Q86T29 641 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 LAS2Q8IYD9 372 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 PTGR2Q8N8N7 351 aaPredicted RBP7.79□□□□□ -1.16
VPS13D-212ENST00000543766 SLC38A9Q8NBW4 561 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 MDGA1Q8NFP4 955 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 OR10G6Q8NH81 332 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 C8orf46Q8TAG6 207 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 NEIL3Q8TAT5 605 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 OR5P2Q8WZ92 322 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 SF3B6Q9Y3B4 125 aaKnown RBP7.79□□□□□ -1.16
VPS13D-212ENST00000543766 WASHC3Q9Y3C0 194 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 LOC102723996A0A087X1L8 192 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 C1QTNF9BB2RNN3 333 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 H7BYZ3 331 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 FCGR2AP12318 317 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 CD38P28907 300 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 IAH1Q2TAA2 248 aaPredicted RBP7.79□□□□□ -1.16
VPS13D-212ENST00000543766 TMEM183AQ8IXX5 376 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 RAB42Q8N4Z0 105 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 POC1AQ8NBT0 407 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 SLC30A7Q8NEW0 376 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 OR2G3Q8NGZ4 309 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 ZIC5Q96T25 663 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 ISG20L2Q9H9L3 353 aaKnown RBP7.79□□□□□ -1.16
VPS13D-212ENST00000543766 A4GALTQ9NPC4 353 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 AURKAIP1Q9NWT8 199 aaPredicted RBP7.79□□□□□ -1.16
VPS13D-212ENST00000543766 MTCH2Q9Y6C9 303 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 LOC107984640A0A0U1RRK4 108 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 H7C417 338 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 MPDU1O75352 247 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 HPXP02790 462 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 AADACP22760 399 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 RPL12P30050 165 aaKnown RBP7.79□□□□□ -1.16
VPS13D-212ENST00000543766 GPR6P46095 362 aaPredicted RBP7.79□□□□□ -1.16
VPS13D-212ENST00000543766 CAV3P56539 151 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 CLRN1P58418 232 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 MRPS34P82930 218 aaKnown RBP7.79□□□□□ -1.16
VPS13D-212ENST00000543766 PLXDC2Q6UX71 529 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 MRGPRGQ86SM5 289 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 STHQ8IWL8 128 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 TMED6Q8WW62 240 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 PIGCQ92535 297 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 Q9N2K0 584 aa7.79□□□□□ -1.16
VPS13D-212ENST00000543766 ZNF106Q9H2Y7 1883 aaKnown RBP7.78□□□□□ -1.16
VPS13D-212ENST00000543766 B4DEV8 164 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 PRDX3P30048 256 aaKnown RBP7.78□□□□□ -1.16
VPS13D-212ENST00000543766 RPS25P62851 125 aaKnown RBP7.78□□□□□ -1.16
VPS13D-212ENST00000543766 ROM1Q03395 351 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 TMEM255AQ5JRV8 349 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 C10orf91Q5T1B1 145 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 MOB3CQ70IA8 216 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 UBALD2Q8IYN6 164 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 OR5AN1Q8NGI8 311 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 SKA2Q8WVK7 121 aaPredicted RBP7.78□□□□□ -1.16
VPS13D-212ENST00000543766 RDH5Q92781 318 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 ANXA10Q9UJ72 324 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 ERG28Q9UKR5 140 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 ZNF780BQ9Y6R6 833 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 RANBP2P49792 3224 aaKnown RBP7.78□□□□□ -1.16
VPS13D-212ENST00000543766 XIRP2A4UGR9 3374 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 A0A1W2PQM1 296 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 PRR19A6NJB7 356 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 SYNGR3O43761 229 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 OR3A2P47893 321 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 CATR1Q13166 79 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 VGLL4Q14135 290 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 ZNF549Q6P9A3 640 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 CD200R1LQ6Q8B3 271 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 IL17RELQ6ZVW7 336 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 CMTM4Q8IZR5 234 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 OR2I1PQ8NGU4 316 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 TMEM37Q8WXS4 190 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 HINT3Q9NQE9 182 aaKnown RBP7.78□□□□□ -1.16
VPS13D-212ENST00000543766 KCNIP1Q9NZI2 227 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 UQCR10Q9UDW1 63 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 GREB1Q4ZG55 1949 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 GOLGA4Q13439 2230 aaKnown RBP7.78□□□□□ -1.16
VPS13D-212ENST00000543766 PPP5D1E7EU14 171 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 CNMDO75829 334 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 LGALS4P56470 323 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 RHOBP62745 196 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 GSG1Q2KHT4 349 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 ADAMTSL5Q6ZMM2 481 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 HOXB13Q92826 284 aaPredicted RBP7.78□□□□□ -1.16
VPS13D-212ENST00000543766 IGSF8Q969P0 613 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 C10orf35Q96D05 121 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 EDA2RQ9HAV5 297 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 PIPOXQ9P0Z9 390 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 THAP10Q9P2Z0 257 aaPredicted RBP7.78□□□□□ -1.16
VPS13D-212ENST00000543766 VCANP13611 3396 aa7.78□□□□□ -1.16
VPS13D-212ENST00000543766 TRBV20-1A0A075B6N2 111 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 NAP1L6A6NFF2 107 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 CD3EP07766 207 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 FUT6P51993 359 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 DLK1P80370 383 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 OR7A5Q15622 319 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 HEPN1Q6WQI6 88 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 OR51F2Q8NH61 342 aa7.77□□□□□ -1.17
VPS13D-212ENST00000543766 RBKSQ9H477 322 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms