RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 FAM90A23PA8MXZ1 464 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 MRPL33O75394 65 aaKnown RBP11.64□□□□□ -0.55
PPME1-208ENST00000543525 FAM90A15PP0C7V4 464 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 FAM90A13PP0C7W8 464 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 FAM90A14PP0C7W9 464 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 FAM90A24PP0C7X0 464 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 EDN3P14138 238 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 P2RY1P47900 373 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 HFEQ30201 348 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 SLC23A3Q6PIS1 610 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 Q6ZRG5 221 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 RAB11FIP2Q7L804 512 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.64□□□□□ -0.55
PPME1-208ENST00000543525 FAM185AQ8N0U4 392 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 ZNF611Q8N823 705 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 OR5L1Q8NGL2 311 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 ABHD3Q8WU67 409 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 WNT2BQ93097 391 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 ZNF845Q96IR2 970 aaPredicted RBP11.64□□□□□ -0.55
PPME1-208ENST00000543525 ZPBPQ9BS86 351 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 LINC00470Q9BZP3 86 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 ARV1Q9H2C2 271 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 MLXQ9UH92 298 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 MYO7BQ6PIF6 2116 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 PINLYPA6NC86 204 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 CD5P06127 495 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 SFTA3P0C7M3 94 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 AADACP22760 399 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 ACP1P24666 158 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 NPBWR1P48145 328 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 DVL1P1P54792 670 aaPredicted RBP11.64□□□□□ -0.55
PPME1-208ENST00000543525 SRPXP78539 464 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 TSPO2Q5TGU0 170 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 FBXW12Q6X9E4 464 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 CBLN2Q8IUK8 224 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 COMMD1Q8N668 190 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 MSI2Q96DH6 328 aaKnown RBP11.64□□□□□ -0.55
PPME1-208ENST00000543525 PLSCR2Q9NRY7 297 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 P4HTMQ9NXG6 502 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 PLA2G2EQ9NZK7 142 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 TMED3Q9Y3Q3 217 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 NCOR2Q9Y618 2525 aa11.64□□□□□ -0.55
PPME1-208ENST00000543525 IGKV3D-15A0A087WSY6 115 aa11.63□□□□□ -0.55
PPME1-208ENST00000543525 PRSS44E7EML9 344 aa11.63□□□□□ -0.55
PPME1-208ENST00000543525 ZNF587BE7ETH6 402 aa11.63□□□□□ -0.55
PPME1-208ENST00000543525 RPL36A-HNRNPH2H7BZ11 118 aa11.63□□□□□ -0.55
PPME1-208ENST00000543525 ST8SIA3O43173 380 aa11.63□□□□□ -0.55
PPME1-208ENST00000543525 PHF1O43189 567 aaPredicted RBP11.63□□□□□ -0.55
PPME1-208ENST00000543525 NDUFA2O43678 99 aa11.63□□□□□ -0.55
PPME1-208ENST00000543525 ZNF205O95201 554 aa11.63□□□□□ -0.55
PPME1-208ENST00000543525 SEC11BP0C7V7 166 aa11.63□□□□□ -0.55
PPME1-208ENST00000543525 COLCA1Q6ZS62 124 aa11.63□□□□□ -0.55
PPME1-208ENST00000543525 SLC25A26Q70HW3 274 aa11.63□□□□□ -0.55
PPME1-208ENST00000543525 SAXO1Q8IYX7 474 aa11.63□□□□□ -0.55
PPME1-208ENST00000543525 Q8NFD4 153 aa11.63□□□□□ -0.55
PPME1-208ENST00000543525 OR10Z1Q8NGY1 313 aa11.63□□□□□ -0.55
PPME1-208ENST00000543525 GLYATL2Q8WU03 294 aa11.63□□□□□ -0.55
PPME1-208ENST00000543525 SLC39A7Q92504 469 aa11.63□□□□□ -0.55
PPME1-208ENST00000543525 ERGIC1Q969X5 290 aa11.63□□□□□ -0.55
PPME1-208ENST00000543525 OR7C1O76099 320 aaPredicted RBP11.62□□□□□ -0.55
PPME1-208ENST00000543525 DIRAS3O95661 229 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 F12P00748 615 aaPredicted RBP11.62□□□□□ -0.55
PPME1-208ENST00000543525 GLAP06280 429 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 HEXAP06865 529 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 ARF1P84077 181 aaKnown RBP11.62□□□□□ -0.55
PPME1-208ENST00000543525 FOXO1Q12778 655 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 PDCD1Q15116 288 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 HMGN3Q15651 99 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 SRSF7Q16629 238 aaKnown RBP eCLIP11.62□□□□□ -0.555e-6■■■□□ 18.4
PPME1-208ENST00000543525 Q6ZS49 121 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 TIPARPQ7Z3E1 657 aaKnown RBP11.62□□□□□ -0.55
PPME1-208ENST00000543525 CALHM1Q8IU99 346 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 CPEB3Q8NE35 698 aaKnown RBP11.62□□□□□ -0.55
PPME1-208ENST00000543525 OR11L1Q8NGX0 322 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 LYPD6BQ8NI32 183 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 THOC3Q96J01 351 aaKnown RBP11.62□□□□□ -0.55
PPME1-208ENST00000543525 KIRREL1Q96J84 757 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 FAM173AQ9BQD7 235 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 GINS3Q9BRX5 216 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 STRADBQ9C0K7 418 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 LRFN1Q9P244 771 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 B4GALT7Q9UBV7 327 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 VPS13AQ96RL7 3174 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 PQLC2LA1A4F0 135 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 AGPAT2O15120 278 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 SYNGR4O95473 234 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 TSPAN15O95858 294 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 PPYP01298 95 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 CD80P33681 288 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 GNMTQ14749 295 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 DPPA2Q7Z7J5 298 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 EXTL1Q92935 676 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 TAAR9Q96RI9 348 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 PAPOLGQ9BWT3 736 aaKnown RBP11.62□□□□□ -0.55
PPME1-208ENST00000543525 LUZP4Q9P127 313 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 RCL1Q9Y2P8 373 aaKnown RBP11.62□□□□□ -0.55
PPME1-208ENST00000543525 R4GN57 208 aa11.62□□□□□ -0.55
PPME1-208ENST00000543525 NCKAP5O14513 1909 aa11.61□□□□□ -0.55
PPME1-208ENST00000543525 C3orf85A0A1B0GTC6 90 aa11.61□□□□□ -0.55
PPME1-208ENST00000543525 MPPED1O15442 326 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms