RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 GTSCR1Q86UQ5 136 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 LYPD6Q86Y78 171 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 FUNDC1Q8IVP5 155 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 ZDHHC21Q8IVQ6 265 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 ZDHHC23Q8IYP9 409 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 KIRREL3Q8IZU9 778 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 MNS1Q8NEH6 495 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 OR51L1Q8NGJ5 315 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF596Q8TC21 504 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 HPSE2Q8WWQ2 592 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 AQP3Q92482 292 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 TOMM40LQ969M1 308 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 ITFG2Q969R8 447 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 RNF125Q96EQ8 232 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 CENPOQ9BU64 300 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 POLR2J2Q9GZM3 115 aaKnown RBP3.67□□□□□ -1.82
LIMS1-214ENST00000542845 POLR2J3Q9H1A7 115 aaKnown RBP3.67□□□□□ -1.82
LIMS1-214ENST00000542845 OR51I2Q9H344 312 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 LIN7CQ9NUP9 197 aaKnown RBP3.67□□□□□ -1.82
LIMS1-214ENST00000542845 MRPL22Q9NWU5 206 aaKnown RBP3.67□□□□□ -1.82
LIMS1-214ENST00000542845 SIGLEC8Q9NYZ4 499 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 HSF4Q9ULV5 492 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 SLC22A13Q9Y226 551 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 KLK5Q9Y337 293 aaPredicted RBP3.67□□□□□ -1.82
LIMS1-214ENST00000542845 CEPT1Q9Y6K0 416 aa3.67□□□□□ -1.82
LIMS1-214ENST00000542845 TRBV5-3A0A0A0MS03 114 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 UNC119BA6NIH7 251 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 LINC01619G3V211 115 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 I3L521 148 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 K7N7A8 449 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF593O00488 134 aaPredicted RBP3.66□□□□□ -1.82
LIMS1-214ENST00000542845 HSPA12AO43301 675 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 XRCC3O43542 346 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 CNIH1O95406 144 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 IGKV1D-33P01593 117 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 IGKV1-33P01594 117 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 IGF1P05019 195 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 OR8U9P0C7N5 309 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 PSKH1P11801 424 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 CFL1P23528 166 aaKnown RBP3.66□□□□□ -1.82
LIMS1-214ENST00000542845 GABRR1P24046 479 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 CDK2P24941 298 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 ACKR3P25106 362 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 NFYBP25208 207 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 PPIFP30405 207 aaKnown RBP3.66□□□□□ -1.82
LIMS1-214ENST00000542845 OTX1P32242 354 aaPredicted RBP3.66□□□□□ -1.82
LIMS1-214ENST00000542845 SLC15A1P46059 708 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 HAAOP46952 286 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 GPR12P47775 334 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 CCR9P51686 369 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 CRYBA2P53672 197 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF121P58317 390 aaPredicted RBP3.66□□□□□ -1.82
LIMS1-214ENST00000542845 ISL1P61371 349 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 GNG3P63215 75 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 RPP30P78346 268 aaKnown RBP3.66□□□□□ -1.82
LIMS1-214ENST00000542845 BDH1Q02338 343 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 KPNB1Q14974 876 aaKnown RBP3.66□□□□□ -1.82
LIMS1-214ENST00000542845 SNCBQ16143 134 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 WHAMMP3Q1A5X7 153 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 FAM76BQ5HYJ3 339 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 PLCXD3Q63HM9 321 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 DGAT2L7PQ6IED9 249 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 OR52W1Q6IF63 320 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 CCDC144NLQ6NUI1 221 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 DLEU7Q6UYE1 221 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 DPY19L2P2Q6ZN68 376 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 MBOAT2Q6ZWT7 520 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.66□□□□□ -1.82
LIMS1-214ENST00000542845 RNF113BQ8IZP6 322 aaKnown RBP3.66□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF491Q8N8L2 437 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 POC1AQ8NBT0 407 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 PROKR2Q8NFJ6 384 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 FAM81AQ8TBF8 368 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 ZNRF4Q8WWF5 429 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 RPEQ96AT9 228 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 RSRC1Q96IZ7 334 aaKnown RBP3.66□□□□□ -1.82
LIMS1-214ENST00000542845 PRRC1Q96M27 445 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 RASL11BQ9BPW5 248 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 NRIP2Q9BQI9 281 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 DPCDQ9BVM2 203 aaPredicted RBP3.66□□□□□ -1.82
LIMS1-214ENST00000542845 ELOVL1Q9BW60 279 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 IFT27Q9BW83 186 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 CHST6Q9GZX3 395 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 KLK15Q9H2R5 256 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 RABEP2Q9H5N1 569 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 PLEKHA3Q9HB20 300 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF286AQ9HBT8 521 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 FAM30AQ9NZY2 134 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 ZNF319Q9P2F9 582 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 DNAJB9Q9UBS3 223 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 HAO1Q9UJM8 370 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 VSIG4Q9Y279 399 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 SIGLEC7Q9Y286 467 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 WSB1Q9Y6I7 421 aa3.66□□□□□ -1.82
LIMS1-214ENST00000542845 TNCP24821 2201 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 TRGV11A0A075B6L2 103 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 IGHV3-72A0A0B4J1Y9 119 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 PGPEP1LA6NFU8 196 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 ZNF878C9JN71 531 aa3.65□□□□□ -1.83
LIMS1-214ENST00000542845 TSPAN4O14817 238 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms