RNA–Protein interactions for RNA: ENST00000541953.5

CLSTN3-213, Transcript of calsyntenin 3, humanhuman

TSL 5

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-213ENST00000541953 C9orf152Q5JTZ5 239 aa12.27□□□□□ -0.45
CLSTN3-213ENST00000541953 ZNF329Q86UD4 541 aa12.27□□□□□ -0.45
CLSTN3-213ENST00000541953 MRPL41Q8IXM3 137 aaKnown RBP12.27□□□□□ -0.45
CLSTN3-213ENST00000541953 FAM58AQ8N1B3 248 aa12.27□□□□□ -0.45
CLSTN3-213ENST00000541953 SPACA5Q96QH8 159 aa12.27□□□□□ -0.45
CLSTN3-213ENST00000541953 TEX12Q9BXU0 123 aa12.27□□□□□ -0.45
CLSTN3-213ENST00000541953 ING3Q9NXR8 418 aa12.27□□□□□ -0.45
CLSTN3-213ENST00000541953 UBE2J1Q9Y385 318 aaPredicted RBP12.27□□□□□ -0.45
CLSTN3-213ENST00000541953 LY6LH3BQJ8 138 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 MGST3O14880 152 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 ATP8B1O43520 1251 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 OR2H2O95918 312 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 KRT8P05787 483 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 ISL1P61371 349 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 ZNF85Q03923 595 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 DIAPH2-AS1Q14236 149 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 C17orf58Q2M2W7 97 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 HLA-DRB5Q30154 266 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 TP53I3Q53FA7 332 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 TPTE2P1Q5T6R2 138 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 HEPN1Q6WQI6 88 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 C16orf82Q7Z2V1 217 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 OR4X2Q8NGF9 303 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 OR10AC1Q8NH08 325 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 NOL4LQ96MY1 436 aaPredicted RBP12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 MNTQ99583 582 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 PPIL3Q9H2H8 161 aaKnown RBP12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 SEBOXQ9HB31 216 aaPredicted RBP12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 GSTK1Q9Y2Q3 226 aa12.26□□□□□ -0.45
CLSTN3-213ENST00000541953 METTL15A6NJ78 407 aa12.25□□□□□ -0.45
CLSTN3-213ENST00000541953 GATBO75879 557 aaKnown RBP12.25□□□□□ -0.45
CLSTN3-213ENST00000541953 CD34P28906 385 aa12.25□□□□□ -0.45
CLSTN3-213ENST00000541953 ERP29P30040 261 aaKnown RBP12.25□□□□□ -0.45
CLSTN3-213ENST00000541953 IL18R1Q13478 541 aa12.25□□□□□ -0.45
CLSTN3-213ENST00000541953 OR10H4Q8NGA5 316 aa12.25□□□□□ -0.45
CLSTN3-213ENST00000541953 OR5D18Q8NGL1 313 aa12.25□□□□□ -0.45
CLSTN3-213ENST00000541953 NRBF2Q96F24 287 aa12.25□□□□□ -0.45
CLSTN3-213ENST00000541953 DUX3Q96PT4 197 aa12.25□□□□□ -0.45
CLSTN3-213ENST00000541953 B9D2Q9BPU9 175 aa12.25□□□□□ -0.45
CLSTN3-213ENST00000541953 ZNF649Q9BS31 505 aa12.25□□□□□ -0.45
CLSTN3-213ENST00000541953 HMG20AQ9NP66 347 aa12.25□□□□□ -0.45
CLSTN3-213ENST00000541953 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLSTN3-213ENST00000541953 KRT84Q9NSB2 600 aa12.25□□□□□ -0.45
CLSTN3-213ENST00000541953 LINC00527Q9UJ94 153 aa12.25□□□□□ -0.45
CLSTN3-213ENST00000541953 POMPQ9Y244 141 aa12.25□□□□□ -0.45
CLSTN3-213ENST00000541953 LEUTXA8MZ59 168 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 BUB1B-PAK6H3BSN5 160 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 IGHV3-7P01780 117 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 OR3A4PP47883 348 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 RBP2P50120 134 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 NANOS3P60323 173 aaKnown RBP12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 ACTR3P61158 418 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 CD69Q07108 199 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 PDZK1IP1Q13113 114 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 RBM39Q14498 530 aaKnown RBP12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 KDM4DQ6B0I6 523 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 Q6P435 159 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 ZBTB49Q6ZSB9 765 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 C8orf86Q6ZUL3 223 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 GID4Q8IVV7 300 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 OSR2Q8N2R0 312 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 CCDC197Q8NCU1 140 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 OR51A4Q8NGJ6 313 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 DNAJC9Q8WXX5 260 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 CORO2AQ92828 525 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 STMN2Q93045 179 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 LEAP2Q969E1 77 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 H2AFY2Q9P0M6 372 aaPredicted RBP12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 STAB2Q8WWQ8 2551 aa12.24□□□□□ -0.45
CLSTN3-213ENST00000541953 TRGV10A0A0A0MS01 117 aa12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 ODAMA1E959 279 aa12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 SNRNP70P08621 437 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 ATF1P18846 271 aa12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 BRS3P32247 399 aa12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 THBS3P49746 956 aa12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 ATP1B3P54709 279 aa12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 MTCP1P56278 107 aa12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 RPL23AP62750 156 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 ATXN7L3Q14CW9 347 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 SPIN3Q5JUX0 258 aa12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 Q8IYB0 196 aa12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 ENTHD1Q8IYW4 607 aa12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 DNAAF1Q8NEP3 725 aa12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 ZNF596Q8TC21 504 aa12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 FGGYQ96C11 551 aa12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 SLC7A6OSQ96CW6 309 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 RBMXL1Q96E39 390 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 AKR1E2Q96JD6 320 aa12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 EXOSC4Q9NPD3 245 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 GNG8Q9UK08 70 aa12.23□□□□□ -0.45
CLSTN3-213ENST00000541953 A0A087X0M5 115 aa12.22□□□□□ -0.45
CLSTN3-213ENST00000541953 A0A1B0GX30 115 aa12.22□□□□□ -0.45
CLSTN3-213ENST00000541953 PSMB11A5LHX3 300 aa12.22□□□□□ -0.45
CLSTN3-213ENST00000541953 SLC33A1O00400 549 aaPredicted RBP12.22□□□□□ -0.45
CLSTN3-213ENST00000541953 OR2T7P0C7T2 308 aa12.22□□□□□ -0.45
CLSTN3-213ENST00000541953 LMO1P25800 156 aa12.22□□□□□ -0.45
CLSTN3-213ENST00000541953 HTR1FP30939 366 aa12.22□□□□□ -0.45
CLSTN3-213ENST00000541953 SCN1BQ07699 218 aa12.22□□□□□ -0.45
CLSTN3-213ENST00000541953 CDK5R1Q15078 307 aa12.22□□□□□ -0.45
CLSTN3-213ENST00000541953 OR2W3Q7Z3T1 314 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms