RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 FAM71E2Q8N5Q1 922 aa14.84□□□□□ -0.03
SPIDR-227ENST00000541342 KIRREL1Q96J84 757 aa14.84□□□□□ -0.03
SPIDR-227ENST00000541342 CLCC1Q96S66 551 aa14.84□□□□□ -0.03
SPIDR-227ENST00000541342 SULT4A1Q9BR01 284 aa14.84□□□□□ -0.03
SPIDR-227ENST00000541342 SMIM3Q9BZL3 60 aa14.84□□□□□ -0.03
SPIDR-227ENST00000541342 EGLN1Q9GZT9 426 aa14.84□□□□□ -0.03
SPIDR-227ENST00000541342 C1orf123Q9NWV4 160 aa14.84□□□□□ -0.03
SPIDR-227ENST00000541342 EIF3GO75821 320 aaKnown RBP eCLIP14.83□□□□□ -0.04
SPIDR-227ENST00000541342 PATE4P0C8F1 98 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 TNFSF10P50591 281 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 RIPPLY2Q5TAB7 128 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 SECTM1Q8WVN6 248 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 PGAM5Q96HS1 289 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 DEFB127Q9H1M4 99 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 DECR2Q9NUI1 292 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 GHRLQ9UBU3 117 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 NOSIPQ9Y314 301 aaKnown RBP14.83□□□□□ -0.04
SPIDR-227ENST00000541342 SHANK1Q9Y566 2161 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 CRYM-AS1A6NIL9 109 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 GAPDHP04406 335 aaKnown RBP14.83□□□□□ -0.04
SPIDR-227ENST00000541342 CST2P09228 141 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 FCGR2AP12318 317 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 FOLR2P14207 255 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 TSPO2Q5TGU0 170 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 TUSC5Q8IXB3 177 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 FGFBP3Q8TAT2 258 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 PIGTQ969N2 578 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 FOXB1Q99853 325 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 IFT22Q9H7X7 185 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 C14orf166Q9Y224 244 aaKnown RBP14.83□□□□□ -0.04
SPIDR-227ENST00000541342 TIMM10BQ9Y5J6 103 aa14.83□□□□□ -0.04
SPIDR-227ENST00000541342 DHRS3O75911 302 aa14.82□□□□□ -0.04
SPIDR-227ENST00000541342 ZNF205O95201 554 aa14.82□□□□□ -0.04
SPIDR-227ENST00000541342 DVL1P1P54792 670 aaPredicted RBP14.82□□□□□ -0.04
SPIDR-227ENST00000541342 SLC10A1Q14973 349 aa14.82□□□□□ -0.04
SPIDR-227ENST00000541342 GGNBP1Q5YKI7 109 aa14.82□□□□□ -0.04
SPIDR-227ENST00000541342 PRRX2Q99811 253 aa14.82□□□□□ -0.04
SPIDR-227ENST00000541342 CHST5Q9GZS9 411 aa14.82□□□□□ -0.04
SPIDR-227ENST00000541342 MEMO1Q9Y316 297 aa14.82□□□□□ -0.04
SPIDR-227ENST00000541342 GVINP1Q7Z2Y8 2422 aa14.82□□□□□ -0.04
SPIDR-227ENST00000541342 ACAA1P09110 424 aaPredicted RBP14.82□□□□□ -0.04
SPIDR-227ENST00000541342 PAX6P26367 422 aa14.82□□□□□ -0.04
SPIDR-227ENST00000541342 RBMXP38159 391 aaKnown RBP14.82□□□□□ -0.04
SPIDR-227ENST00000541342 EIF5AL1Q6IS14 154 aaKnown RBP14.82□□□□□ -0.04
SPIDR-227ENST00000541342 RPUSD3Q6P087 351 aaKnown RBP14.82□□□□□ -0.04
SPIDR-227ENST00000541342 RRP8O43159 456 aaKnown RBP14.82□□□□□ -0.04
SPIDR-227ENST00000541342 SYNGR3O43761 229 aa14.82□□□□□ -0.04
SPIDR-227ENST00000541342 GABRR1P24046 479 aa14.82□□□□□ -0.04
SPIDR-227ENST00000541342 EIF5AP63241 154 aaKnown RBP14.82□□□□□ -0.04
SPIDR-227ENST00000541342 PMP22Q01453 160 aa14.82□□□□□ -0.04
SPIDR-227ENST00000541342 ZNF774Q6NX45 483 aa14.82□□□□□ -0.04
SPIDR-227ENST00000541342 STARD10Q9Y365 291 aa14.82□□□□□ -0.04
SPIDR-227ENST00000541342 A0A0U1RQV5 110 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 M0R135 149 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 CRYGSP22914 178 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 ZNF799Q96GE5 643 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 Q96M66 194 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 SPRR3Q9UBC9 169 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 PIGLQ9Y2B2 252 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 BOD1L1Q8NFC6 3051 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 SGCEO43556 437 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 MRPL33O75394 65 aaKnown RBP14.81□□□□□ -0.04
SPIDR-227ENST00000541342 SYNGR4O95473 234 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 CTSDP07339 412 aaPredicted RBP14.81□□□□□ -0.04
SPIDR-227ENST00000541342 ZNF32P17041 273 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 CPT2P23786 658 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 CLN3Q13286 438 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 Q6ZSR3 168 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 CALHM2Q9HA72 323 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 LSM5Q9Y4Y9 91 aaKnown RBP14.81□□□□□ -0.04
SPIDR-227ENST00000541342 JTBO76095 146 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 SNRPEP62304 92 aaKnown RBP14.81□□□□□ -0.04
SPIDR-227ENST00000541342 RAB35Q15286 201 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 SNAI3Q3KNW1 292 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 HIST1H2BAQ96A08 127 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 C14orf79Q96F83 325 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 COL25A1Q9BXS0 654 aaPredicted RBP14.81□□□□□ -0.04
SPIDR-227ENST00000541342 ARV1Q9H2C2 271 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 WFDC1Q9HC57 220 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 SLC7A10Q9NS82 523 aa14.81□□□□□ -0.04
SPIDR-227ENST00000541342 CA11O75493 328 aa14.8□□□□□ -0.04
SPIDR-227ENST00000541342 FAM76BQ5HYJ3 339 aa14.8□□□□□ -0.04
SPIDR-227ENST00000541342 TMEM178AQ8NBL3 297 aa14.8□□□□□ -0.04
SPIDR-227ENST00000541342 UBAC2Q8NBM4 344 aa14.8□□□□□ -0.04
SPIDR-227ENST00000541342 AKR7LQ8NHP1 331 aa14.8□□□□□ -0.04
SPIDR-227ENST00000541342 ZDHHC11Q9H8X9 412 aa14.8□□□□□ -0.04
SPIDR-227ENST00000541342 ELL3Q9HB65 397 aaPredicted RBP14.8□□□□□ -0.04
SPIDR-227ENST00000541342 CEP250Q9BV73 2442 aa14.8□□□□□ -0.04
SPIDR-227ENST00000541342 MBPP02686 304 aaPredicted RBP14.8□□□□□ -0.04
SPIDR-227ENST00000541342 IFNA4P05014 189 aa14.8□□□□□ -0.04
SPIDR-227ENST00000541342 ZNF44P15621 663 aa14.8□□□□□ -0.04
SPIDR-227ENST00000541342 FHITP49789 147 aa14.8□□□□□ -0.04
SPIDR-227ENST00000541342 FAM3AP98173 230 aa14.8□□□□□ -0.04
SPIDR-227ENST00000541342 PSG4Q00888 419 aa14.8□□□□□ -0.04
SPIDR-227ENST00000541342 AKIRIN2Q53H80 203 aa14.8□□□□□ -0.04
SPIDR-227ENST00000541342 SMCO4Q9NRQ5 59 aa14.8□□□□□ -0.04
SPIDR-227ENST00000541342 ANXA10Q9UJ72 324 aa14.8□□□□□ -0.04
SPIDR-227ENST00000541342 POMT1Q9Y6A1 747 aa14.8□□□□□ -0.04
SPIDR-227ENST00000541342 PPT1P50897 306 aa14.79□□□□□ -0.04
SPIDR-227ENST00000541342 SP6Q3SY56 376 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms