RNA–Protein interactions for RNA: ENST00000541204.5

RNF4-222, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 2,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-222ENST00000541204 STARD10Q9Y365 291 aa10.84□□□□□ -0.67
RNF4-222ENST00000541204 KPTNQ9Y664 436 aa10.84□□□□□ -0.67
RNF4-222ENST00000541204 IGKV1-27A0A075B6S5 117 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 MED19A0JLT2 244 aaPredicted RBP10.83□□□□□ -0.68
RNF4-222ENST00000541204 C1QL1O75973 258 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 LCATP04180 440 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 ACAA1P09110 424 aaPredicted RBP10.83□□□□□ -0.68
RNF4-222ENST00000541204 ZNF883P0CG24 379 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 ZNF728P0DKX0 622 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 FOLR2P14207 255 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 ZNF32P17041 273 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 TMEM187Q14656 261 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 ABCA11PQ4W5N1 156 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 PHLDA2Q53GA4 152 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 AWAT1Q58HT5 328 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 ATP1A1-AS1Q5TC04 95 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 FAM27BQ5VT28 67 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 KCNE4Q8WWG9 221 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 RTN4IP1Q8WWV3 396 aaPredicted RBP10.83□□□□□ -0.68
RNF4-222ENST00000541204 ISOC2Q96AB3 205 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 IP6K3Q96PC2 410 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 ZPBPQ9BS86 351 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 EIF5A2Q9GZV4 153 aaKnown RBP10.83□□□□□ -0.68
RNF4-222ENST00000541204 METTL9Q9H1A3 318 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 PLEKHA2Q9HB19 425 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 NECAP2Q9NVZ3 263 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 KCNIP3Q9Y2W7 256 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 E5RGE8 158 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 NEURL1O76050 574 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 MT-CO3P00414 261 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 DAOP14920 347 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 PTAFRP25105 342 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 HIST1H3AP68431 136 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 MRPS34P82930 218 aaKnown RBP10.83□□□□□ -0.68
RNF4-222ENST00000541204 FOXO1Q12778 655 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 HIST2H3PS2Q5TEC6 136 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 HIST2H3AQ71DI3 136 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 SPRY4Q9C004 299 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 SH3BGRL3Q9H299 93 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 NAA60Q9H7X0 242 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 EDARQ9UNE0 448 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 NSG2Q9Y328 171 aa10.83□□□□□ -0.68
RNF4-222ENST00000541204 LINC01387J3KSC0 135 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 TNFSF15O95150 251 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 DANCRP0C864 163 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 ZNF44P15621 663 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 MAGEA5P43359 124 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 HTR5AP47898 357 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 C3AR1Q16581 482 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 GUK1Q16774 197 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 OR52M1Q8NGK5 317 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 OR5L1Q8NGL2 311 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 DDA1Q9BW61 102 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 SF3B5Q9BWJ5 86 aaKnown RBP10.82□□□□□ -0.68
RNF4-222ENST00000541204 EGLN1Q9GZT9 426 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 RGCCQ9H4X1 137 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 TMEM38BQ9NVV0 291 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 C1orf196B1AJZ1 125 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 PRSS44E7EML9 344 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 GLAP06280 429 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 NHLH2Q02577 135 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 PIGYQ3MUY2 71 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 DCAF10Q5QP82 559 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 Q6ZSR3 168 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 BATF2Q8N1L9 274 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 ADGRG7Q96K78 797 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 FOXB1Q99853 325 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 SCRT1Q9BWW7 348 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 ARV1Q9H2C2 271 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 SPACA1Q9HBV2 294 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 ZDHHC8Q9ULC8 765 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 ZNF407Q9C0G0 2248 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 A0A096LPE4 126 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 A0A1B0GV50 99 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 A0A1W2PPZ6 126 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 C7orf77A4D0Y5 90 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 M0R036 132 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 GEMIN2O14893 280 aaKnown RBP10.82□□□□□ -0.68
RNF4-222ENST00000541204 PAX6P26367 422 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 CAMLGP49069 296 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 PDCD1Q15116 288 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 OR1C1Q15619 314 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 HES3Q5TGS1 186 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 SLC22A25Q6T423 547 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 RBMS3Q6XE24 437 aaKnown RBP10.82□□□□□ -0.68
RNF4-222ENST00000541204 FOXL2NBQ6ZUU3 175 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 OR2M7Q8NG81 312 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 OR11L1Q8NGX0 322 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 C10orf35Q96D05 121 aa10.82□□□□□ -0.68
RNF4-222ENST00000541204 BOKQ9UMX3 212 aaPredicted RBP10.82□□□□□ -0.68
RNF4-222ENST00000541204 MED13Q9UHV7 2174 aa10.81□□□□□ -0.68
RNF4-222ENST00000541204 A0A1W2PPE3 182 aa10.81□□□□□ -0.68
RNF4-222ENST00000541204 PRH1P02810 166 aa10.81□□□□□ -0.68
RNF4-222ENST00000541204 SEC11BP0C7V7 166 aa10.81□□□□□ -0.68
RNF4-222ENST00000541204 CCNOP22674 350 aa10.81□□□□□ -0.68
RNF4-222ENST00000541204 NOVA1P51513 510 aaKnown RBP10.81□□□□□ -0.68
RNF4-222ENST00000541204 GFRA1P56159 465 aa10.81□□□□□ -0.68
RNF4-222ENST00000541204 PSG4Q00888 419 aa10.81□□□□□ -0.68
RNF4-222ENST00000541204 KRBOX4Q5JUW0 171 aa10.81□□□□□ -0.68
RNF4-222ENST00000541204 PLA2G2CQ5R387 149 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 106.9 ms