RNA–Protein interactions for RNA: ENST00000541005.1

LTBR-208, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-208ENST00000541005 RAB26Q9ULW5 256 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 TPRKBQ9Y3C4 175 aa10.73□□□□□ -0.69
LTBR-208ENST00000541005 hCG_1809904A0A1W2PP81 198 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 A0A1W2PPE2 198 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 A0A1W2PR64 198 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 A0A1W2PRV1 198 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 TMEM89A2RUT3 159 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 C17orf98A8MV24 154 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 PTGES3LE9PB15 166 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 SH2D1BO14796 132 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 MGST3O14880 152 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 NPFFO15130 113 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 OR2H2O95918 312 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 CSN2P05814 226 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 MELTFP08582 738 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 CELP19835 753 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 CRHBPP24387 322 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 DUSP1P28562 367 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 ERP29P30040 261 aaKnown RBP10.72□□□□□ -0.69
LTBR-208ENST00000541005 BDKRB2P30411 391 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 OR3A1P47881 315 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 KLRD1Q13241 179 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 DDI2Q5TDH0 399 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 Q6P435 159 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 OR4M1Q8NGD0 313 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 OR51T1Q8NGJ9 327 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 PPP1R35Q8TAP8 253 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 TNFAIP8L1Q8WVP5 186 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 SGCDQ92629 289 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 SLC25A28Q96A46 364 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 DERL3Q96Q80 235 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 OR14A2Q96R54 314 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 EXOSC4Q9NPD3 245 aaKnown RBP10.72□□□□□ -0.69
LTBR-208ENST00000541005 CKLFQ9UBR5 152 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 FOXJ3Q9UPW0 622 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 GSTK1Q9Y2Q3 226 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 POMT1Q9Y6A1 747 aa10.72□□□□□ -0.69
LTBR-208ENST00000541005 TRAV8-7A0A075B6U6 113 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 A0A0U1RQK1 487 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 MAGEA13PA6NCF6 341 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 CCL3L1P16619 93 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 GABRR1P24046 479 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 EEF1B2P24534 225 aaKnown RBP10.71□□□□□ -0.69
LTBR-208ENST00000541005 MAPK3P27361 379 aaPredicted RBP10.71□□□□□ -0.69
LTBR-208ENST00000541005 SAA4P35542 130 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 ZNF93P35789 620 aaPredicted RBP10.71□□□□□ -0.69
LTBR-208ENST00000541005 VHLP40337 213 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 PTGFRP43088 359 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 OR3A4PP47883 348 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 DLX1P56177 255 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 ACTG1P63261 375 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 GPR50Q13585 617 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 IL13RA2Q14627 380 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 SPHARQ15513 63 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 GRK1Q15835 563 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 MIDNQ504T8 468 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 CDH26Q8IXH8 852 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 PDZD9Q8IXQ8 264 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 OR4S1Q8NGB4 309 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 SSMEM1Q8WWF3 244 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 ZDHHC16Q969W1 377 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 OR5M11Q96RB7 305 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 GPER1Q99527 375 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 LINC00312Q9Y6C7 94 aa10.71□□□□□ -0.69
LTBR-208ENST00000541005 PNMA8CA0A1B0GUJ8 204 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 hADV38S2A0JD32 116 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 SIRPB1O00241 398 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 SLC33A1O00400 549 aaPredicted RBP10.7□□□□□ -0.7
LTBR-208ENST00000541005 PIN1P1O15428 100 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 HOXA3O43365 443 aaPredicted RBP10.7□□□□□ -0.7
LTBR-208ENST00000541005 RGS10O43665 173 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 FBP1P09467 338 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 ZNF728P0DKX0 622 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 HKR1P10072 659 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 CALCBP10092 127 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 SNU13P55769 128 aaKnown RBP10.7□□□□□ -0.7
LTBR-208ENST00000541005 P2RX3P56373 397 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 EDDM3BP56851 147 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 ERVFRD-1P60508 538 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 PAX5Q02548 391 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 PRB3Q04118 309 aaPredicted RBP10.7□□□□□ -0.7
LTBR-208ENST00000541005 NHLRC3Q5JS37 347 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 RBM48Q5RL73 367 aaKnown RBP10.7□□□□□ -0.7
LTBR-208ENST00000541005 PRSS48Q7RTY5 328 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 SATL1Q86VE3 508 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 MS4A15Q8N5U1 240 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 ORAI1Q96D31 301 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 ZNF714Q96N38 554 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 DUX5Q96PT3 197 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 ZNF184Q99676 751 aaPredicted RBP10.7□□□□□ -0.7
LTBR-208ENST00000541005 CHST6Q9GZX3 395 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 HEXA-AS1Q9H8Q6 139 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 SF3B6Q9Y3B4 125 aaKnown RBP10.7□□□□□ -0.7
LTBR-208ENST00000541005 DNHD1Q96M86 4753 aa10.7□□□□□ -0.7
LTBR-208ENST00000541005 A0A0G2JK05 382 aa10.69□□□□□ -0.7
LTBR-208ENST00000541005 SC5DO75845 299 aa10.69□□□□□ -0.7
LTBR-208ENST00000541005 ZNF44P15621 663 aa10.69□□□□□ -0.7
LTBR-208ENST00000541005 TGFBR2P37173 567 aa10.69□□□□□ -0.7
LTBR-208ENST00000541005 RPL15P61313 204 aaKnown RBP10.69□□□□□ -0.7
LTBR-208ENST00000541005 EDDM3AQ14507 147 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms