RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 OR4M2Q8NGB6 313 aa14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 FAM3DQ96BQ1 224 aa14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 GAFA1Q96PS6 74 aa14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 CENPOQ9BU64 300 aa14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 TMEM59Q9BXS4 323 aa14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 KCNS2Q9ULS6 477 aa14.58□□□□□ -0.08
CLSTN3-210ENST00000540931 VPS13CQ709C8 3753 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 LOC105371242A0A075B767 164 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 hCG_1809904A0A1W2PP81 198 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 A0A1W2PPE2 198 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 A0A1W2PR64 198 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 A0A1W2PRV1 198 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 MGST3O14880 152 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 TGFAP01135 160 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 CALCBP10092 127 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 MGMTP16455 207 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 ARL6IP1Q15041 203 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 ZNF841Q6ZN19 808 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 GDPD3Q7L5L3 318 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 OR8H2Q8N162 312 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 ASCC1Q8N9N2 400 aaKnown RBP14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 TMEM185AQ8NFB2 350 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 TMEM186Q96B77 213 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 KCTD12Q96CX2 325 aaKnown RBP14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 BARHL1Q9BZE3 327 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 NCOR1P1Q9H4R4 102 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 TMEM160Q9NX00 188 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 NDUFA13Q9P0J0 144 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 RAB22AQ9UL26 194 aa14.57□□□□□ -0.08
CLSTN3-210ENST00000540931 METTL21EPA6NDL7 271 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 F8VVB4 439 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 F8VWA3 439 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 CA11O75493 328 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 OR2H2O95918 312 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 TK1P04183 234 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 RAB6AP20340 208 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 ERP29P30040 261 aaKnown RBP14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 COL10A1Q03692 680 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 MEF2CQ06413 473 aaPredicted RBP14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 DYNC1I2Q13409 638 aaKnown RBP14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 IKZF1Q13422 519 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 GPR107Q5VW38 600 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 SFXN4Q6P4A7 337 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 LYPD2Q6UXB3 125 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 CMTM4Q8IZR5 234 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 CIARTQ8N365 385 aaPredicted RBP14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 CD177Q8N6Q3 437 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 RAB40AQ8WXH6 277 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 MSI2Q96DH6 328 aaKnown RBP14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 SMR3AQ99954 134 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 ABRACLQ9P1F3 81 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 MAB21L2Q9Y586 359 aa14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 FN1P02751 2386 aaKnown RBP14.56□□□□□ -0.08
CLSTN3-210ENST00000540931 TMEM14DPA8MWL7 114 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 OR7C1O76099 320 aaPredicted RBP14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 PPIAL4GP0DN37 164 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 VSIG8P0DPA2 414 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 NDUFB7P17568 137 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 HNF1AP20823 631 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 GABRR1P24046 479 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 RPS27AP62979 156 aaKnown RBP14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 PAX5Q02548 391 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 DCAF12L2Q5VW00 463 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 FAM216BQ8N7L0 139 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 ZNRF1Q8ND25 227 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 C8orf46Q8TAG6 207 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 ST8SIA4Q92187 359 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 AP3S1Q92572 193 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 SLC25A28Q96A46 364 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 SEH1LQ96EE3 360 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 Q96M66 194 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 C1orf147Q96MC9 270 aaPredicted RBP14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 SELENOIQ9C0D9 397 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 LIN7BQ9HAP6 207 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 CTSZQ9UBR2 303 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 ETV7Q9Y603 341 aa14.55□□□□□ -0.08
CLSTN3-210ENST00000540931 KIR2DS1A0A191URI9 304 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 POM121CA8CG34 1229 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 FAM157AC9JC47 383 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 MCRIP1C9JLW8 97 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 ZNF701M0R085 212 aaPredicted RBP14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 ZNF737O75373 536 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 FUT3P21217 361 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 IL2RGP31785 369 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 SOX6P35712 828 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 SCGB2A2Q13296 93 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 BLMHQ13867 455 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 C2orf76Q3KRA6 126 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 CLEC9AQ6UXN8 241 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 C1orf122Q6ZSJ8 110 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 Q71RC1 249 aaPredicted RBP14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 BTN2A1Q7KYR7 527 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 RNF144BQ7Z419 303 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 CLVS1Q8IUQ0 354 aaPredicted RBP14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 OR51D1Q8NGF3 324 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 OR56B1Q8NGI3 324 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 OR10K1Q8NGX5 313 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 ACOT12Q8WYK0 555 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 NEDD4LQ96PU5 975 aa14.54□□□□□ -0.08
CLSTN3-210ENST00000540931 GFI1Q99684 422 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 170.6 ms