RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 POC1AQ8NBT0 407 aa11.82□□□□□ -0.52
RTN3-210ENST00000540798 NAXEQ8NCW5 288 aa11.82□□□□□ -0.52
RTN3-210ENST00000540798 BOD1Q96IK1 185 aa11.82□□□□□ -0.52
RTN3-210ENST00000540798 PRR13Q9NZ81 148 aa11.82□□□□□ -0.52
RTN3-210ENST00000540798 MTCH1Q9NZJ7 389 aa11.82□□□□□ -0.52
RTN3-210ENST00000540798 ZNF629Q9UEG4 869 aaPredicted RBP11.82□□□□□ -0.52
RTN3-210ENST00000540798 TINAGQ9UJW2 476 aa11.82□□□□□ -0.52
RTN3-210ENST00000540798 AQP7O14520 342 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 IFNA2P01563 188 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 PGAM2P15259 253 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 SLAMF9Q96A28 289 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 DMRTA2Q96SC8 542 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 ZNF286AQ9HBT8 521 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 MPC1Q9Y5U8 109 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 ZFHX4Q86UP3 3567 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 C13orf42A0A1B0GVH6 325 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 MPTX1A8MV57 137 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 ZNF732B4DXR9 585 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 F8W036 122 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 H0YIZ8 118 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 RLN2P04090 185 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 PLEKHN1Q494U1 663 aaPredicted RBP11.81□□□□□ -0.52
RTN3-210ENST00000540798 MKXQ8IYA7 352 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 SLC30A7Q8NEW0 376 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 OR10C1Q96KK4 312 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 CELSR3Q9NYQ7 3312 aa11.81□□□□□ -0.52
RTN3-210ENST00000540798 F8VVB4 439 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 F8VWA3 439 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 LGALS8O00214 317 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 UCP3P55916 312 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 SLC22A25Q6T423 547 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 C2orf50Q96LR7 162 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 HS3ST6Q96QI5 342 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 PLSCR2Q9NRY7 297 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 TRAV17A0A0B4J275 112 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 KANTRA0A1W2PQU2 76 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 hCG_1807616A0A1W2PRN6 198 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 MFSD2BA6NFX1 497 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 LILRA1O75019 489 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 IGHV1-2P23083 117 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 MPV17LQ2QL34 196 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 OR5L1Q8NGL2 311 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 PHYHIPLQ96FC7 376 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 PIK3IP1Q96FE7 263 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 PRELID3BQ9Y3B1 194 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 TEX13DA0A0J9YY54 714 aaPredicted RBP11.8□□□□□ -0.52
RTN3-210ENST00000540798 OR5B21A6NL26 309 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 SPDEFO95238 335 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 NAPSAO96009 420 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 PDCD1Q15116 288 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 FBXW12Q6X9E4 464 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 LINC00596Q86U02 117 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 CXorf58Q96LI9 332 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 SLC25A32Q9H2D1 315 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 ESRP2Q9H6T0 727 aaKnown RBP11.8□□□□□ -0.52
RTN3-210ENST00000540798 C1orf123Q9NWV4 160 aa11.8□□□□□ -0.52
RTN3-210ENST00000540798 WISP2O76076 250 aa11.79□□□□□ -0.52
RTN3-210ENST00000540798 OR7C1O76099 320 aaPredicted RBP11.79□□□□□ -0.52
RTN3-210ENST00000540798 CNOT4O95628 575 aaKnown RBP11.79□□□□□ -0.52
RTN3-210ENST00000540798 KNG1P01042 644 aa11.79□□□□□ -0.52
RTN3-210ENST00000540798 HOXB1P14653 301 aaPredicted RBP11.79□□□□□ -0.52
RTN3-210ENST00000540798 PRSS54Q6PEW0 395 aa11.79□□□□□ -0.52
RTN3-210ENST00000540798 FAM214BQ7L5A3 538 aa11.79□□□□□ -0.52
RTN3-210ENST00000540798 MYPOPQ86VE0 399 aaPredicted RBP11.79□□□□□ -0.52
RTN3-210ENST00000540798 OR1S1Q8NH92 325 aa11.79□□□□□ -0.52
RTN3-210ENST00000540798 MOB3AQ96BX8 217 aa11.79□□□□□ -0.52
RTN3-210ENST00000540798 GALNT14Q96FL9 552 aa11.79□□□□□ -0.52
RTN3-210ENST00000540798 RASL12Q9NYN1 266 aa11.79□□□□□ -0.52
RTN3-210ENST00000540798 LHX6Q9UPM6 363 aa11.79□□□□□ -0.52
RTN3-210ENST00000540798 FAM221AA4D161 298 aa11.79□□□□□ -0.52
RTN3-210ENST00000540798 RBM39Q14498 530 aaKnown RBP11.79□□□□□ -0.52
RTN3-210ENST00000540798 ATRAIDQ6UW56 229 aa11.79□□□□□ -0.52
RTN3-210ENST00000540798 P4HA3Q7Z4N8 544 aa11.79□□□□□ -0.52
RTN3-210ENST00000540798 SGPP2Q8IWX5 399 aa11.79□□□□□ -0.52
RTN3-210ENST00000540798 EXTL1Q92935 676 aa11.79□□□□□ -0.52
RTN3-210ENST00000540798 ANKRD30BLA7E2S9 258 aa11.78□□□□□ -0.52
RTN3-210ENST00000540798 ZNF728P0DKX0 622 aa11.78□□□□□ -0.52
RTN3-210ENST00000540798 IL24Q13007 206 aa11.78□□□□□ -0.52
RTN3-210ENST00000540798 ATXN7L3Q14CW9 347 aaPredicted RBP11.78□□□□□ -0.52
RTN3-210ENST00000540798 TBC1D28Q2M2D7 210 aa11.78□□□□□ -0.52
RTN3-210ENST00000540798 Q6ZT83 130 aa11.78□□□□□ -0.52
RTN3-210ENST00000540798 INO80EQ8NBZ0 244 aaPredicted RBP11.78□□□□□ -0.52
RTN3-210ENST00000540798 STOML3Q8TAV4 291 aa11.78□□□□□ -0.52
RTN3-210ENST00000540798 RBPMSQ93062 196 aaKnown RBP11.78□□□□□ -0.52
RTN3-210ENST00000540798 RRNAD1Q96FB5 475 aaKnown RBP11.78□□□□□ -0.52
RTN3-210ENST00000540798 PKIBQ9C010 78 aa11.78□□□□□ -0.52
RTN3-210ENST00000540798 ZNF442Q9H7R0 627 aa11.78□□□□□ -0.52
RTN3-210ENST00000540798 SYNGR1O43759 233 aa11.78□□□□□ -0.52
RTN3-210ENST00000540798 GABRA6Q16445 453 aa11.78□□□□□ -0.52
RTN3-210ENST00000540798 LRTM2Q8N967 370 aa11.78□□□□□ -0.52
RTN3-210ENST00000540798 PRSS33Q8NF86 280 aa11.78□□□□□ -0.52
RTN3-210ENST00000540798 GTF3AQ92664 365 aaKnown RBP11.78□□□□□ -0.52
RTN3-210ENST00000540798 HIST1H2AAQ96QV6 131 aa11.78□□□□□ -0.52
RTN3-210ENST00000540798 RSRP1Q9BUV0 290 aa11.78□□□□□ -0.52
RTN3-210ENST00000540798 PLK3Q9H4B4 646 aa11.78□□□□□ -0.52
RTN3-210ENST00000540798 SPENQ96T58 3664 aaKnown RBP11.78□□□□□ -0.52
RTN3-210ENST00000540798 TRAPPC2LH3BP13 241 aa11.77□□□□□ -0.52
RTN3-210ENST00000540798 SMPD2O60906 423 aa11.77□□□□□ -0.52
RTN3-210ENST00000540798 FCGR2CP31995 323 aa11.77□□□□□ -0.52
RTN3-210ENST00000540798 ZNF573Q86YE8 665 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms