RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 ZNF706Q9Y5V0 76 aaPredicted RBP1.07□□□□□ -2.24
MDM2-227ENST00000540709 HELZ2Q9BYK8 2649 aaKnown RBP1.07□□□□□ -2.24
MDM2-227ENST00000540709 DYSFO75923 2080 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 VWDEQ8N2E2 1590 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 TRBV24-1A0A075B6N3 115 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 A6NED7 52 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 ZNF99A8MXY4 864 aaPredicted RBP1.06□□□□□ -2.24
MDM2-227ENST00000540709 LY6LH3BQJ8 138 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 FFAR1O14842 300 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 CASC3O15234 703 aaKnown RBP1.06□□□□□ -2.24
MDM2-227ENST00000540709 GPR75O95800 540 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 PDYNP01213 254 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 RLN2P04090 185 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 TPM1P09493 284 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 IL12BP29460 328 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 TMEM176BQ3YBM2 270 aaPredicted RBP1.06□□□□□ -2.24
MDM2-227ENST00000540709 HSP90AA4PQ58FG1 418 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 ACSBG2Q5FVE4 666 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 TMEM215Q68D42 235 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 ZNF767PQ75MW2 155 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 CYP4Z1Q86W10 505 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 NELFCDQ8IXH7 590 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 MSRB3Q8IXL7 192 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 OR5T3Q8NGG3 340 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 OR6K3Q8NGY3 331 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 OR51A7Q8NH64 312 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 OR2V1Q8NHB1 315 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 TNFRSF14Q92956 283 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 ANAPC13Q9BS18 74 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 IL22Q9GZX6 179 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 BLZF1Q9H2G9 400 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 SLC38A1Q9H2H9 487 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 MFSD1Q9H3U5 465 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 PLEKHA1Q9HB21 404 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 ZNF286AQ9HBT8 521 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 C12orf4Q9NQ89 552 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 CYB5R1Q9UHQ9 305 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 U3KQK5 164 aa1.06□□□□□ -2.24
MDM2-227ENST00000540709 KMT2BQ9UMN6 2715 aaPredicted RBP1.05□□□□□ -2.24
MDM2-227ENST00000540709 GOLGA6L7A0A1B0GV03 622 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 SEC14L6B5MCN3 397 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 KLRC4-KLRK1H3BQV0 150 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 M0R1B8 84 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 AKR7A2O43488 359 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 MBP02144 154 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 GUSBP08236 651 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 SOD3P08294 240 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 PRTN3P24158 256 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 IVDP26440 423 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 ARR3P36575 388 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 RPL31P62899 125 aaKnown RBP1.05□□□□□ -2.24
MDM2-227ENST00000540709 GPR176Q14439 515 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 HIKESHIQ53FT3 197 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 CAVIN4Q5BKX8 364 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 DUPD1Q68J44 220 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 NOXRED1Q6NXP6 359 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 EPGNQ6UW88 154 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 SETD3Q86TU7 594 aaPredicted RBP1.05□□□□□ -2.24
MDM2-227ENST00000540709 PDCL2Q8N4E4 241 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 OR52K1Q8NGK4 314 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 OR2K2Q8NGT1 345 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 NDNFQ8TB73 568 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 TCP10LQ8TDR4 215 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 ZNF75CPQ92670 426 aaPredicted RBP1.05□□□□□ -2.24
MDM2-227ENST00000540709 BCL7BQ9BQE9 202 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 C20orf144Q9BQM9 153 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 TXNDC17Q9BRA2 123 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 SHCBP1LQ9BZQ2 653 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 ANXA10Q9UJ72 324 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 SLC22A14Q9Y267 594 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 PHLPP2Q6ZVD8 1323 aa1.05□□□□□ -2.24
MDM2-227ENST00000540709 AQRO60306 1485 aaKnown RBP eCLIP1.05□□□□□ -2.24
MDM2-227ENST00000540709 IGKV1D-37A0A075B6S9 117 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 A0A1B0GTQ1 180 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 ZNF593O00488 134 aaPredicted RBP1.04□□□□□ -2.24
MDM2-227ENST00000540709 GYG2O15488 501 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 S100A9P06702 114 aaKnown RBP1.04□□□□□ -2.24
MDM2-227ENST00000540709 PSKH1P11801 424 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 CTLA4P16410 223 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 ZNF22P17026 224 aaPredicted RBP1.04□□□□□ -2.24
MDM2-227ENST00000540709 TUBG1P23258 451 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 CNTFRP26992 372 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 CARD18P57730 90 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 PSG4Q00888 419 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 STK38Q15208 465 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 LINC00523Q86TU6 105 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 CA13Q8N1Q1 262 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 TRIML2Q8N7C3 387 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 RNASE11Q8TAA1 199 aaKnown RBP1.04□□□□□ -2.24
MDM2-227ENST00000540709 LMX1AQ8TE12 382 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 TWIST2Q8WVJ9 160 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 SIKE1Q9BRV8 207 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 RGCCQ9H4X1 137 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 TUBG2Q9NRH3 451 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 ZMAT5Q9UDW3 170 aaKnown RBP1.04□□□□□ -2.24
MDM2-227ENST00000540709 OR5V1Q9UGF6 321 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 CHTOPQ9Y3Y2 248 aaKnown RBP1.04□□□□□ -2.24
MDM2-227ENST00000540709 SYNRGQ9UMZ2 1314 aa1.04□□□□□ -2.24
MDM2-227ENST00000540709 PLXNB3Q9ULL4 1909 aa1.03□□□□□ -2.24
MDM2-227ENST00000540709 LOC100653049A0A140TA62 436 aa1.03□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms