RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 HKR1P10072 659 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 IGFBP3P17936 291 aaPredicted RBP12.29□□□□□ -0.44
UBE3B-212ENST00000540230 CELP19835 753 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 MYF6P23409 242 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 PAX6P26367 422 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 OR3A4PP47883 348 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 AWAT1Q58HT5 328 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 NCR3LG1Q68D85 454 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 Q6P435 159 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 C16orf87Q6PH81 154 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 FIP1L1Q6UN15 594 aaKnown RBP12.29□□□□□ -0.44
UBE3B-212ENST00000540230 IZUMO2Q6UXV1 221 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 LDLRAD3Q86YD5 345 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 ZSCAN4Q8NAM6 433 aaPredicted RBP12.29□□□□□ -0.44
UBE3B-212ENST00000540230 OR5D13Q8NGL4 314 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 TNFAIP8L1Q8WVP5 186 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 AJUBAQ96IF1 538 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 OR14A2Q96R54 314 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 OR5M11Q96RB7 305 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 GPER1Q99527 375 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 ANKRD60Q9BZ19 345 aa12.29□□□□□ -0.44
UBE3B-212ENST00000540230 EXOSC4Q9NPD3 245 aaKnown RBP12.29□□□□□ -0.44
UBE3B-212ENST00000540230 C17orf98A8MV24 154 aa12.28□□□□□ -0.44
UBE3B-212ENST00000540230 H0YHG0 523 aa12.28□□□□□ -0.44
UBE3B-212ENST00000540230 COX7A1P24310 79 aa12.28□□□□□ -0.44
UBE3B-212ENST00000540230 EEF1B2P24534 225 aaKnown RBP12.28□□□□□ -0.44
UBE3B-212ENST00000540230 BMXP51813 675 aa12.28□□□□□ -0.44
UBE3B-212ENST00000540230 TAS2R43P59537 309 aa12.28□□□□□ -0.44
UBE3B-212ENST00000540230 SLC35A2P78381 396 aa12.28□□□□□ -0.44
UBE3B-212ENST00000540230 Q499Y3 187 aa12.28□□□□□ -0.44
UBE3B-212ENST00000540230 YIF1BQ5BJH7 314 aa12.28□□□□□ -0.44
UBE3B-212ENST00000540230 DDI2Q5TDH0 399 aa12.28□□□□□ -0.44
UBE3B-212ENST00000540230 PXT1Q8NFP0 134 aa12.28□□□□□ -0.44
UBE3B-212ENST00000540230 FAM192AQ9GZU8 254 aa12.28□□□□□ -0.44
UBE3B-212ENST00000540230 ZNRD1Q9P1U0 126 aa12.28□□□□□ -0.44
UBE3B-212ENST00000540230 LSM2Q9Y333 95 aaKnown RBP12.28□□□□□ -0.44
UBE3B-212ENST00000540230 KIAA2026Q5HYC2 2103 aa12.28□□□□□ -0.44
UBE3B-212ENST00000540230 TRBV5-7A0A0A0MS05 114 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 FAM181BA6NEQ2 426 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 SH2D1BO14796 132 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 PIN1P1O15428 100 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 MAGEB3O15480 346 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 CDRT1O95170 752 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 ALDOBP05062 364 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 ZNF44P15621 663 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 LMO1P25800 156 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 CFPP27918 469 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 IER3P46695 156 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 SCN1BQ07699 218 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 INSL4Q14641 139 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 TAF9Q16594 264 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 TBC1D15Q8TC07 691 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 SSMEM1Q8WWF3 244 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 PPA2Q9H2U2 334 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 TMEM138Q9NPI0 162 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 ZNF581Q9P0T4 197 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 ERGIC3Q9Y282 383 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 FAM96BQ9Y3D0 163 aa12.27□□□□□ -0.44
UBE3B-212ENST00000540230 A0A0G2JK05 382 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 A0A1W2PPH5 198 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 SLC33A1O00400 549 aaPredicted RBP12.27□□□□□ -0.45
UBE3B-212ENST00000540230 MGST3O14880 152 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 ATP6V1G2O95670 118 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 FBP1P09467 338 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 ZNF728P0DKX0 622 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 OMGP23515 440 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 BDKRB2P30411 391 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 PPP3R1P63098 170 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 RELBQ01201 579 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 ACSM1Q08AH1 577 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 RIPK1Q13546 671 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 IRF3Q14653 427 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 PIGYQ3MUY2 71 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 RNLSQ5VYX0 342 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 TMEM86BQ8N661 226 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 NR1H4Q96RI1 486 aaPredicted RBP12.27□□□□□ -0.45
UBE3B-212ENST00000540230 ZNF184Q99676 751 aaPredicted RBP12.27□□□□□ -0.45
UBE3B-212ENST00000540230 CDCA4Q9BXL8 241 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 RHOFQ9HBH0 211 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 GLS2Q9UI32 602 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 SF3B6Q9Y3B4 125 aaKnown RBP12.27□□□□□ -0.45
UBE3B-212ENST00000540230 POMT1Q9Y6A1 747 aa12.27□□□□□ -0.45
UBE3B-212ENST00000540230 GPX5O75715 221 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 MMP23AO75900 390 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 FSTP19883 344 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 ZNF93P35789 620 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-212ENST00000540230 PTGFRP43088 359 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 GLIPR1P48060 266 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 MTNR1BP49286 362 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 P2RX3P56373 397 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 MEF2CQ06413 473 aaPredicted RBP12.26□□□□□ -0.45
UBE3B-212ENST00000540230 AESQ08117 197 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 LDLRAD2Q5SZI1 272 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 ELP2Q6IA86 826 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 ASCL4Q6XD76 172 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 Q8NFD4 153 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 COQ2Q96H96 371 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 ZNF714Q96N38 554 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 DERL3Q96Q80 235 aa12.26□□□□□ -0.45
UBE3B-212ENST00000540230 MND1Q9BWT6 205 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms