RNA–Protein interactions for RNA: ENST00000540090.5

LPCAT3-210, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 1 (best)

Gene LPCAT3, Length 974 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-210ENST00000540090 CANT1Q8WVQ1 401 aa15.8■□□□□ 0.12
LPCAT3-210ENST00000540090 ASB9Q96DX5 294 aa15.8■□□□□ 0.12
LPCAT3-210ENST00000540090 BORCS8Q96FH0 119 aa15.8■□□□□ 0.12
LPCAT3-210ENST00000540090 ZNF286AQ9HBT8 521 aa15.8■□□□□ 0.12
LPCAT3-210ENST00000540090 CLN6Q9NWW5 311 aa15.8■□□□□ 0.12
LPCAT3-210ENST00000540090 DYNC2H1Q8NCM8 4307 aaKnown RBP15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 FAM90A18PA6NE21 464 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 FAM90A16PA6NEW6 464 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 FAM90A20PA6NIJ5 464 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 FAM90A9PA6NNJ1 464 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 FAM90A12PA8MX19 464 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 FAM90A5PA8MXJ8 464 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 OOSP1A8MZH6 123 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 ZNF670-ZNF695F2Z2N8 137 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 H0YHG0 523 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 ENTPD6O75354 484 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 SERPINA3P01011 423 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 FAM90A15PP0C7V4 464 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 FAM90A13PP0C7W8 464 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 FAM90A14PP0C7W9 464 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 FAM90A24PP0C7X0 464 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 FAM106CPP0CH98 169 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 BCL3P20749 454 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 LMO1P25800 156 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 GDNFP39905 211 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 MNDAP41218 407 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 ODF4Q2M2E3 257 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 SPIN3Q5JUX0 258 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 CCDC144NLQ6NUI1 221 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 CATSPERDQ86XM0 798 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 THNSL2Q86YJ6 484 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 CCDC54Q8NEL0 328 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 MOB4Q9Y3A3 225 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 LSM4Q9Y4Z0 139 aaKnown RBP15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 HSPE1-MOB4S4R3N1 261 aa15.79■□□□□ 0.12
LPCAT3-210ENST00000540090 HUWE1Q7Z6Z7 4374 aaKnown RBP15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 SACSQ9NZJ4 4579 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 A0A087X0M5 115 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 A0A1B0GX30 115 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 FUOMA2VDF0 154 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 FAM172BPA6NC97 362 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 H3BSH0 61 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 TOR1AO14656 332 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 RAMP3O60896 148 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 RPP14O95059 124 aaKnown RBP15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 OR3A4PP47883 348 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 RBP2P50120 134 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 PRRX1P54821 245 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 EFNB1P98172 346 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 KPNB1Q14974 876 aaKnown RBP15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 PTGES3Q15185 160 aaKnown RBP15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 AADACL4Q5VUY2 407 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 DNAAF1Q8NEP3 725 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 CHPT1Q8WUD6 406 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 TFAP2CQ92754 450 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 C10orf35Q96D05 121 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 NSL1Q96IY1 281 aa15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 H2AFY2Q9P0M6 372 aaPredicted RBP15.78■□□□□ 0.12
LPCAT3-210ENST00000540090 C3orf84H3BNL1 204 aa15.77■□□□□ 0.12
LPCAT3-210ENST00000540090 ZFPL1O95159 310 aa15.77■□□□□ 0.12
LPCAT3-210ENST00000540090 CYB5AP00167 134 aa15.77■□□□□ 0.12
LPCAT3-210ENST00000540090 CALCBP10092 127 aa15.77■□□□□ 0.12
LPCAT3-210ENST00000540090 HOXB6P17509 224 aaKnown RBP15.77■□□□□ 0.12
LPCAT3-210ENST00000540090 PRKACAP17612 351 aa15.77■□□□□ 0.12
LPCAT3-210ENST00000540090 GLIPR1P48060 266 aa15.77■□□□□ 0.12
LPCAT3-210ENST00000540090 ATP1B3P54709 279 aa15.77■□□□□ 0.12
LPCAT3-210ENST00000540090 YIPF7Q8N8F6 280 aa15.77■□□□□ 0.12
LPCAT3-210ENST00000540090 DNAJC9Q8WXX5 260 aa15.77■□□□□ 0.12
LPCAT3-210ENST00000540090 NOL4LQ96MY1 436 aaPredicted RBP15.77■□□□□ 0.12
LPCAT3-210ENST00000540090 ADI1Q9BV57 179 aa15.77■□□□□ 0.12
LPCAT3-210ENST00000540090 HMG20AQ9NP66 347 aa15.77■□□□□ 0.12
LPCAT3-210ENST00000540090 KIAA2026Q5HYC2 2103 aa15.76■□□□□ 0.11
LPCAT3-210ENST00000540090 AQP12BA6NM10 295 aa15.76■□□□□ 0.11
LPCAT3-210ENST00000540090 NUDT19A8MXV4 375 aa15.76■□□□□ 0.11
LPCAT3-210ENST00000540090 SIRPB1O00241 398 aa15.76■□□□□ 0.11
LPCAT3-210ENST00000540090 SH2D1BO14796 132 aa15.76■□□□□ 0.11
LPCAT3-210ENST00000540090 OR2H2O95918 312 aa15.76■□□□□ 0.11
LPCAT3-210ENST00000540090 KRT8P05787 483 aa15.76■□□□□ 0.11
LPCAT3-210ENST00000540090 SNU13P55769 128 aaKnown RBP15.76■□□□□ 0.11
LPCAT3-210ENST00000540090 AESQ08117 197 aa15.76■□□□□ 0.11
LPCAT3-210ENST00000540090 NKAPLQ5M9Q1 402 aa15.76■□□□□ 0.11
LPCAT3-210ENST00000540090 NXNL2Q5VZ03 156 aa15.76■□□□□ 0.11
LPCAT3-210ENST00000540090 SSX6Q7RTT6 188 aa15.76■□□□□ 0.11
LPCAT3-210ENST00000540090 AQP12AQ8IXF9 295 aa15.76■□□□□ 0.11
LPCAT3-210ENST00000540090 COMMD1Q8N668 190 aa15.76■□□□□ 0.11
LPCAT3-210ENST00000540090 CCDC124Q96CT7 223 aaKnown RBP15.76■□□□□ 0.11
LPCAT3-210ENST00000540090 RYR2Q92736 4967 aa15.75■□□□□ 0.11
LPCAT3-210ENST00000540090 IGKV1-9A0A0C4DH69 117 aa15.75■□□□□ 0.11
LPCAT3-210ENST00000540090 POU3F4P49335 361 aa15.75■□□□□ 0.11
LPCAT3-210ENST00000540090 GP2P55259 537 aaKnown RBP15.75■□□□□ 0.11
LPCAT3-210ENST00000540090 MTCP1P56278 107 aa15.75■□□□□ 0.11
LPCAT3-210ENST00000540090 UTF1Q5T230 341 aa15.75■□□□□ 0.11
LPCAT3-210ENST00000540090 C5orf56Q8N8D9 126 aa15.75■□□□□ 0.11
LPCAT3-210ENST00000540090 KLHL30-AS1Q8NEE0 82 aa15.75■□□□□ 0.11
LPCAT3-210ENST00000540090 OR4D6Q8NGJ1 314 aa15.75■□□□□ 0.11
LPCAT3-210ENST00000540090 PP6455Q8WZ26 134 aa15.75■□□□□ 0.11
LPCAT3-210ENST00000540090 EXOSC4Q9NPD3 245 aaKnown RBP15.75■□□□□ 0.11
LPCAT3-210ENST00000540090 PCDHB16Q9NRJ7 776 aa15.75■□□□□ 0.11
LPCAT3-210ENST00000540090 GSTK1Q9Y2Q3 226 aa15.75■□□□□ 0.11
LPCAT3-210ENST00000540090 ODAMA1E959 279 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms