RNA–Protein interactions for RNA: ENST00000539559.6

TMEM260-203, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 2,680 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-203ENST00000539559 PMELP40967 661 aa17.57■□□□□ 0.4
TMEM260-203ENST00000539559 PPA1Q15181 289 aa17.57■□□□□ 0.4
TMEM260-203ENST00000539559 GPR157Q5UAW9 335 aa17.57■□□□□ 0.4
TMEM260-203ENST00000539559 LGI3Q8N145 548 aa17.57■□□□□ 0.4
TMEM260-203ENST00000539559 OR5L2Q8NGL0 311 aa17.57■□□□□ 0.4
TMEM260-203ENST00000539559 BOD1Q96IK1 185 aa17.57■□□□□ 0.4
TMEM260-203ENST00000539559 SCRG1O75711 98 aa17.57■□□□□ 0.4
TMEM260-203ENST00000539559 CXCL1P09341 107 aa17.57■□□□□ 0.4
TMEM260-203ENST00000539559 P4HA3Q7Z4N8 544 aa17.57■□□□□ 0.4
TMEM260-203ENST00000539559 RAB39BQ96DA2 213 aa17.57■□□□□ 0.4
TMEM260-203ENST00000539559 SPACA9Q96E40 222 aaPredicted RBP17.57■□□□□ 0.4
TMEM260-203ENST00000539559 DUSP23Q9BVJ7 150 aa17.57■□□□□ 0.4
TMEM260-203ENST00000539559 NPIPA2E9PIF3 369 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 NPIPA3F8WFD2 350 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 H3BQ15 152 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 SSSCA1O60232 199 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 CA11O75493 328 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 LCATP04180 440 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 SUCLG1P53597 346 aaKnown RBP17.56■□□□□ 0.4
TMEM260-203ENST00000539559 TSC22D1Q15714 1073 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 RAET1LQ5VY80 246 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 PMS2CLQ68D20 193 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 SLC39A7Q92504 469 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 YPEL4Q96NS1 127 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 SUCNR1Q9BXA5 334 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 DEFB126Q9BYW3 111 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 ULBP2Q9BZM5 246 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 HSF4Q9ULV5 492 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 STRAPQ9Y3F4 350 aaKnown RBP17.56■□□□□ 0.4
TMEM260-203ENST00000539559 IFNA17P01571 189 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 EPHA8P29322 1005 aaPredicted RBP17.56■□□□□ 0.4
TMEM260-203ENST00000539559 RND3P61587 244 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 GNMTQ14749 295 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 PYY3Q5JQD4 70 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 CXorf66Q5JRM2 361 aaPredicted RBP17.56■□□□□ 0.4
TMEM260-203ENST00000539559 RTL6Q6ICC9 239 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 SPSB3Q6PJ21 355 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 OR2C3Q8N628 320 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 TOLLIPQ9H0E2 274 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 ST3GAL6Q9Y274 331 aa17.56■□□□□ 0.4
TMEM260-203ENST00000539559 RBFOX3A6NFN3 312 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 JMJD7P0C870 316 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 EPHA1P21709 976 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 OTX1P32242 354 aaPredicted RBP17.55■□□□□ 0.4
TMEM260-203ENST00000539559 IL13RA2Q14627 380 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 OR2B11Q5JQS5 317 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 OR4D5Q8NGN0 318 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 MUCL1Q96DR8 90 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 BORCS8Q96FH0 119 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 TMPRSS5Q9H3S3 457 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 IGLV3-12A0A075B6K2 115 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 IGLV3-32A0A0A0MS00 114 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 LY86O95711 162 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 PDGFBP01127 241 aaPredicted RBP17.55■□□□□ 0.4
TMEM260-203ENST00000539559 TAGLN2P37802 199 aaKnown RBP17.55■□□□□ 0.4
TMEM260-203ENST00000539559 ZNF674Q2M3X9 581 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 WDR5BQ86VZ2 330 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 PAPOLGQ9BWT3 736 aaKnown RBP17.55■□□□□ 0.4
TMEM260-203ENST00000539559 PARPBPQ9NWS1 579 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 SLC7A11Q9UPY5 501 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 CHCHD2Q9Y6H1 151 aaPredicted RBP17.55■□□□□ 0.4
TMEM260-203ENST00000539559 ADAMTS20P59510 1910 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 HTR5AP47898 357 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 GFI1BQ5VTD9 330 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 Q8WTZ3 238 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 MALSU1Q96EH3 234 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 GLRX2Q9NS18 164 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 PILRBQ9UKJ0 227 aa17.55■□□□□ 0.4
TMEM260-203ENST00000539559 TGIF2-C20orf24A0A0A6YYL0 155 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 RAB2AP61019 212 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 H3F3AP84243 136 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 SPIN3Q5JUX0 258 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 SPNS3Q6ZMD2 512 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 KDF1Q8NAX2 398 aaPredicted RBP17.54■□□□□ 0.4
TMEM260-203ENST00000539559 NAT6Q93015 286 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 TMEM54Q969K7 222 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 SPTSSAQ969W0 71 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 DOK5Q9P104 306 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 CACNA1EQ15878 2313 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 TNFSF11O14788 317 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 TNFSF12O43508 249 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 SPINK2P20155 84 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 RAB5CP51148 216 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 ERVFRD-1P60508 538 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 HERV-K104P61576 105 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 ZNF468Q5VIY5 522 aaPredicted RBP17.54■□□□□ 0.4
TMEM260-203ENST00000539559 TMEM123Q8N131 208 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 CYB561D1Q8N8Q1 229 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 LRTM2Q8N967 370 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 ZNF442Q9H7R0 627 aa17.54■□□□□ 0.4
TMEM260-203ENST00000539559 DTYMKP23919 212 aa17.53■□□□□ 0.4
TMEM260-203ENST00000539559 NTF4P34130 210 aa17.53■□□□□ 0.4
TMEM260-203ENST00000539559 RBP2P50120 134 aa17.53■□□□□ 0.4
TMEM260-203ENST00000539559 UBE2KP61086 200 aa17.53■□□□□ 0.4
TMEM260-203ENST00000539559 C10orf128Q5T292 105 aa17.53■□□□□ 0.4
TMEM260-203ENST00000539559 OSR2Q8N2R0 312 aa17.53■□□□□ 0.4
TMEM260-203ENST00000539559 FADS6Q8N9I5 356 aa17.53■□□□□ 0.4
TMEM260-203ENST00000539559 OR5C1Q8NGR4 320 aa17.53■□□□□ 0.4
TMEM260-203ENST00000539559 MOB3AQ96BX8 217 aa17.53■□□□□ 0.4
TMEM260-203ENST00000539559 ZNF286AQ9HBT8 521 aa17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms