RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 ZFP57Q9NU63 452 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 TMEM100Q9NV29 134 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 TRBV6-7A0A0A0MS04 114 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 BPNT1O95861 308 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 VSIG8P0DPA2 414 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 KISS1Q15726 138 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 GABRA6Q16445 453 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 SLC16A13Q7RTY0 426 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 BAP18Q8IXM2 172 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 NAXEQ8NCW5 288 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 OR5D18Q8NGL1 313 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 PIGTQ969N2 578 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 ARL11Q969Q4 196 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 TLNRD1Q9H1K6 362 aa14.71□□□□□ -0.05
PCDHB17P-201ENST00000539533 DHRS7CA6NNS2 312 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 XRCC2O43543 280 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 PMP2P02689 132 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 PRF1P14222 555 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 TBPP20226 339 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 SRSF3P84103 164 aaKnown RBP14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 GLIPR1L1Q6UWM5 242 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 ZNF610Q8N9Z0 462 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 DMBX1Q8NFW5 382 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 MARCH1Q8TCQ1 289 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 NANOS1Q8WY41 292 aaKnown RBP14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 NMES1Q9C002 83 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 SELENOIQ9C0D9 397 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 OPN3Q9H1Y3 402 aaPredicted RBP14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 ZNF391Q9UJN7 358 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 MRPS28Q9Y2Q9 187 aaKnown RBP14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 RP1L1Q8IWN7 2480 aaPredicted RBP14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 SSX5O60225 188 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 WDR1O75083 606 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 SNAPINO95295 136 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 NAAAQ02083 359 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 PDZK1IP1Q13113 114 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 C10orf91Q5T1B1 145 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 RTN4RL2Q86UN3 420 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 MYPOPQ86VE0 399 aaPredicted RBP14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 ZNF101Q8IZC7 436 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 RNF141Q8WVD5 230 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 SPSB4Q96A44 273 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 C1orf147Q96MC9 270 aaPredicted RBP14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 RNF126Q9BV68 326 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 CARHSP1Q9Y2V2 147 aaKnown RBP14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 STARD10Q9Y365 291 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 NCOR2Q9Y618 2525 aa14.7□□□□□ -0.06
PCDHB17P-201ENST00000539533 A0A0B4J2A0 478 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 FIGNL2A6NMB9 653 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 SCGNO76038 276 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 CNOT4O95628 575 aaKnown RBP14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 CGAP01215 116 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 SERPINA5P05154 406 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 CELA3BP08861 270 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 APLNRP35414 380 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 TDGF1P3P51864 188 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 UCNP55089 124 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 TAS2R31P59538 309 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 PNLIPRP3Q17RR3 467 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 NKAPLQ5M9Q1 402 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 C1orf185Q5T7R7 199 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 C1QL2Q7Z5L3 287 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 DPPA2Q7Z7J5 298 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 HOGA1Q86XE5 327 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 RRNAD1Q96FB5 475 aaKnown RBP14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 CYTL1Q9NRR1 136 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 SHPKQ9UHJ6 478 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 WNT5AP41221 380 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 PTGFRP43088 359 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 UBE2NP61088 152 aaKnown RBP14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 OR8B8Q15620 311 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 ZSCAN4Q8NAM6 433 aaPredicted RBP14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 TMEM104Q8NE00 496 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 OR10R2Q8NGX6 335 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 OR4K15Q8NH41 348 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 FAM57AQ8TBR7 257 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 TMED6Q8WW62 240 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 APOBEC3DQ96AK3 386 aaPredicted RBP14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 OR51B6Q9H340 312 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 TMEM231Q9H6L2 316 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 TREM1Q9NP99 234 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 PROCRQ9UNN8 238 aa14.69□□□□□ -0.06
PCDHB17P-201ENST00000539533 A0A1W2PP11 408 aa14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 MEX3AA1L020 520 aaKnown RBP14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 NUDT19A8MXV4 375 aa14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 COX5AP20674 150 aa14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 SNRPEP62304 92 aaKnown RBP14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 CYCSP99999 105 aaKnown RBP14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 PRR30Q53SZ7 412 aaPredicted RBP14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 CNTNAP3BQ96NU0 1288 aa14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 REPIN1Q9BWE0 567 aaKnown RBP14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 CHD8Q9HCK8 2581 aa14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 TMEM14DPA8MWL7 114 aa14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 C1QTNF9BB2RNN3 333 aa14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 H0YIZ8 118 aa14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 C1QTNF9P0C862 333 aa14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 OR4A4PQ8NGN8 299 aa14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 SNRNP40Q96DI7 357 aaKnown RBP14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 NUDT16L1Q9BRJ7 211 aaKnown RBP14.68□□□□□ -0.06
PCDHB17P-201ENST00000539533 GSN-AS1Q9NRJ2 163 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms