RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 CLEC12BQ2HXU8 276 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 TOLLIPQ9H0E2 274 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 C1orf123Q9NWV4 160 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 PADI1Q9ULC6 663 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 MEMO1Q9Y316 297 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 TGIF2-C20orf24A0A0A6YYL0 155 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 A0A1B0GV90 55 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 CXCL1P09341 107 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 PATE4P0C8F1 98 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 RPS23P62266 143 aaKnown RBP10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 SVIPQ8NHG7 77 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 S100PBPQ96BU1 408 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 NCKAP5O14513 1909 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 A0A0U1RQV5 110 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 TLX3O43711 291 aaPredicted RBP10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 CST7O76096 145 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 IGHV2-5P01817 119 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 OR5H8P0DN80 308 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 ALDH3B1P43353 468 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 DSCR4P56555 118 aaPredicted RBP10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 RUNX1Q01196 453 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 ABCA11PQ4W5N1 156 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 SOHLH1Q5JUK2 328 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 OPN5Q6U736 354 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 MEGF10Q96KG7 1140 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 GPR61Q9BZJ8 451 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 CHST5Q9GZS9 411 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 PRDM6Q9NQX0 595 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 ZDHHC8Q9ULC8 765 aa10.9□□□□□ -0.66
SFSWAP-208ENST00000539506 A0A087WZY1 265 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 NPIPA2E9PIF3 369 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 NPIPA3F8WFD2 350 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 NTN3O00634 580 aaPredicted RBP10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 ZNF84P51523 738 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 SSR4P51571 173 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 B3GALT5-AS1P59052 145 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 BPIFB3P59826 476 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 SLC16A14Q7RTX9 510 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 AGBL5Q8NDL9 886 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 NAT6Q93015 286 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 METTL1Q9UBP6 276 aaKnown RBP10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 IGKV1-27A0A075B6S5 117 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 NUDT19A8MXV4 375 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 M0R135 149 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 PPIHO43447 177 aaKnown RBP10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 TAGLN2P37802 199 aaKnown RBP10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 RPS18P62269 152 aaKnown RBP10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 Q0VFX4 171 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 TSC22D1Q15714 1073 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 FBXW12Q6X9E4 464 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 Q6ZSR3 168 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 SUMF2Q8NBJ7 301 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 HAS2Q92819 552 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 EMG1Q92979 244 aaKnown RBP10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 ZNF799Q96GE5 643 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 PLEK2Q9NYT0 353 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 DOK5Q9P104 306 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 STARD10Q9Y365 291 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 LIPGQ9Y5X9 500 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 PHF1O43189 567 aaPredicted RBP10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 RFPL3SP0C7P2 107 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 FOLR2P14207 255 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 FKBP2P26885 142 aaKnown RBP10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 EIF5AP63241 154 aaKnown RBP10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 ZFP36L1Q07352 338 aaKnown RBP10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 YRDCQ86U90 279 aaKnown RBP10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 RPS19BP1Q86WX3 136 aaKnown RBP10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 CCDC54Q8NEL0 328 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 RTN4IP1Q8WWV3 396 aaPredicted RBP10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 SCRT1Q9BWW7 348 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 EGLN1Q9GZT9 426 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 DNAJB11Q9UBS4 358 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 DKKL1Q9UK85 242 aa10.89□□□□□ -0.67
SFSWAP-208ENST00000539506 HSPB6O14558 160 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 GPX4P36969 197 aaPredicted RBP10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 MLF1P58340 268 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 M1APQ8TC57 530 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 SMOC1Q9H4F8 434 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 PCSK5Q92824 1860 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 FIGNL2A6NMB9 653 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 H3BP45 60 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 CYB5BO43169 146 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 TRGC2P03986 189 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 LYL1P12980 280 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 TDGF1P13385 188 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 CRYGSP22914 178 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 SUCLG1P53597 346 aaKnown RBP10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 PIGYQ3MUY2 71 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 ZNF774Q6NX45 483 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 OR2Y1Q8NGV0 311 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 FGFBP3Q8TAT2 258 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 TM2D1Q9BX74 207 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 SUCNR1Q9BXA5 334 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 ULBP2Q9BZM5 246 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 SLC35B3Q9H1N7 401 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 LUZP4Q9P127 313 aa10.88□□□□□ -0.67
SFSWAP-208ENST00000539506 CCDC187A0A096LP49 1063 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 DANCRP0C864 163 aa10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 GUCA1AP43080 201 aaPredicted RBP10.87□□□□□ -0.67
SFSWAP-208ENST00000539506 RAC1P63000 192 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms