RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 NOVA1P51513 510 aaKnown RBP16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 D2HGDHQ8N465 521 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 ZNF441Q8N8Z8 693 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 PP6455Q8WZ26 134 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 PGAM5Q96HS1 289 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 LYZL4Q96KX0 146 aa16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 LYRM2Q9NU23 88 aaPredicted RBP16.18■□□□□ 0.18
SFSWAP-207ENST00000538548 ATXN7O15265 892 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 OMGP23515 440 aa16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 DPPA3Q6W0C5 159 aa16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 OR5C1Q8NGR4 320 aa16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 OR6X1Q8NH79 312 aa16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 RBM14Q96PK6 669 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 FAAP24Q9BTP7 215 aa16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 CDH20Q9HBT6 801 aa16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 SOHLH2Q9NX45 425 aa16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 WASF3Q9UPY6 502 aa16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 LOC102723971A0A1B0GUV8 181 aa16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 SNRPCP09234 159 aaKnown RBP16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 NKX2-1P43699 371 aaPredicted RBP16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 CAPZBP47756 277 aa16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 C1orf61Q13536 156 aa16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 TMEM31Q5JXX7 168 aa16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 UEVLDQ8IX04 471 aa16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 TMEM252Q8N6L7 170 aa16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 OR1N1Q8NGS0 311 aa16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 HS3ST3A1Q9Y663 406 aa16.17■□□□□ 0.18
SFSWAP-207ENST00000538548 B4DGG1 531 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 H3BML4 177 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 GEMIN2O14893 280 aaKnown RBP16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 DHRS3O75911 302 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 KLF8O95600 359 aaPredicted RBP16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 TFF2Q03403 129 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 C5orf24Q7Z6I8 188 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 CMTM1Q8IZ96 169 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 CCDC71LQ8N9Z2 235 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 MTCH2Q9Y6C9 303 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 C5orf63A6NC05 138 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 VSTM2BA6NLU5 285 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 AMBPP02760 352 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 OPN1MWP04001 364 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 OPN1MW2P0DN77 364 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 OPN1MW3P0DN78 364 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 CEACAM1P13688 526 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 CTSEP14091 401 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 FAHP16930 419 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 UCP3P55916 312 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 FAM90A2PQ658T7 463 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 SLC25A47Q6Q0C1 308 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 P4HA3Q7Z4N8 544 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 OR11L1Q8NGX0 322 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 PIGTQ969N2 578 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 VDAC3Q9Y277 283 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 V9GYS6 101 aa16.16■□□□□ 0.18
SFSWAP-207ENST00000538548 PROB1E7EW31 1015 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 EFNA3P52797 238 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 SRPXP78539 464 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 SMAD4Q13485 552 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 KCNMB1Q16558 191 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 MEX3BQ6ZN04 569 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 MOB3AQ96BX8 217 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 MRGPRX1Q96LB2 322 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 CABLES2Q9BTV7 478 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 PPP1R14DQ9NXH3 145 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 TRAV1-1A0A0B4J248 108 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 NKX2-6A6NCS4 301 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 ONECUT2O95948 504 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 CTSSP25774 331 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 FOXF1Q12946 379 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 NSDHLQ15738 373 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 CPEB2Q7Z5Q1 589 aaKnown RBP16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 DDA1Q9BW61 102 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 GLRX2Q9NS18 164 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 CLEC1BQ9P126 229 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 A0A0U1RQV5 110 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 C2orf72A6NCS6 295 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 RAB11AP62491 216 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 TP53RKQ96S44 253 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 CALHM2Q9HA72 323 aa16.15■□□□□ 0.18
SFSWAP-207ENST00000538548 TDRD6O60522 2096 aaKnown RBP16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 SHANK1Q9Y566 2161 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 CYTIPO60759 359 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 SUMO3P55854 103 aaPredicted RBP16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 RUNX1Q01196 453 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 BAXQ07812 192 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 C17orf67Q0P5P2 114 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 ZNF100Q8IYN0 542 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 OR10A7Q8NGE5 316 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 OR4X1Q8NH49 305 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 ABHD14BQ96IU4 210 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 SPIN2AQ99865 258 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 SPIN2BQ9BPZ2 258 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 TRDCB7Z8K6 153 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 SSSCA1O60232 199 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 PNLIPP16233 465 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 DYNLT3P51808 116 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 CASP6P55212 293 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 VAMP2P63027 116 aa16.14■□□□□ 0.17
SFSWAP-207ENST00000538548 SLC10A1Q14973 349 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms