RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 LGALS8O00214 317 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 SLC34A2O95436 690 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 PET100P0DJ07 73 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 TMEM187Q14656 261 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 TUSC1Q2TAM9 212 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 MDP1Q86V88 176 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 RTN4IP1Q8WWV3 396 aaPredicted RBP12.01□□□□□ -0.49
LIMK1-208ENST00000538333 OR5P3Q8WZ94 311 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 MRPL24Q96A35 216 aaKnown RBP12.01□□□□□ -0.49
LIMK1-208ENST00000538333 LRFN3Q9BTN0 628 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 SLC2A9Q9NRM0 540 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 GSKIPQ9P0R6 139 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 IL36RNQ9UBH0 155 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 TUBD1Q9UJT1 453 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 MEMO1Q9Y316 297 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 SPAARA0A1B0GVQ0 90 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 ZSCAN5BA6NJL1 495 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 KRBOX1C9JBD0 128 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 NAPSAO96009 420 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 NUP62P37198 522 aaPredicted RBP12.01□□□□□ -0.49
LIMK1-208ENST00000538333 FXYD4P59646 89 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 SRSF7Q16629 238 aaKnown RBP eCLIP12.01□□□□□ -0.49
LIMK1-208ENST00000538333 IAH1Q2TAA2 248 aaPredicted RBP12.01□□□□□ -0.49
LIMK1-208ENST00000538333 GGNBP1Q5YKI7 109 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 SUN5Q8TC36 379 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 GMPPAQ96IJ6 420 aaPredicted RBP12.01□□□□□ -0.49
LIMK1-208ENST00000538333 A0A1B0GW55 424 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 TPD52L2O43399 206 aaKnown RBP12□□□□□ -0.49
LIMK1-208ENST00000538333 SYNGR1O43759 233 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 IGHG3P01860 377 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 OR5AC1P0C628 307 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 DUX4L2P0CJ85 424 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 DUX4L3P0CJ86 424 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 DUX4L4P0CJ87 422 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 DUX4L5P0CJ88 424 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 DUX4L6P0CJ89 424 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 DUX4L7P0CJ90 424 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 TPT1P13693 172 aaKnown RBP12□□□□□ -0.49
LIMK1-208ENST00000538333 MPV17LQ2QL34 196 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 BAP18Q8IXM2 172 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 MKXQ8IYA7 352 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 LRTM2Q8N967 370 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 FDCSPQ8NFU4 85 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 NANOS1Q8WY41 292 aaKnown RBP12□□□□□ -0.49
LIMK1-208ENST00000538333 CNTNAP3BQ96NU0 1288 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 CNTNAP3Q9BZ76 1288 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 PLSCR2Q9NRY7 297 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 CLCF1Q9UBD9 225 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 DUX4Q9UBX2 424 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 KCNIP3Q9Y2W7 256 aa12□□□□□ -0.49
LIMK1-208ENST00000538333 FGF16O43320 207 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 WT1P19544 449 aaPredicted RBP11.99□□□□□ -0.49
LIMK1-208ENST00000538333 AADACP22760 399 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 GLP1RP43220 463 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 S100A10P60903 97 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 SP6Q3SY56 376 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 ABCA11PQ4W5N1 156 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 IGSF11Q5DX21 431 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 TFAP2EQ6VUC0 442 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 SLC38A6Q8IZM9 456 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 RSRP1Q9BUV0 290 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 SLC5A7Q9GZV3 580 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 Q9N2K0 584 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 MPC1Q9Y5U8 109 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 PTPRBP23467 1997 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 TRAPPC2LH3BP13 241 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 PHLDA2Q53GA4 152 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 IGFL2Q6UWQ7 119 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 MYPOPQ86VE0 399 aaPredicted RBP11.99□□□□□ -0.49
LIMK1-208ENST00000538333 MSI2Q96DH6 328 aaKnown RBP11.99□□□□□ -0.49
LIMK1-208ENST00000538333 SUCNR1Q9BXA5 334 aa11.99□□□□□ -0.49
LIMK1-208ENST00000538333 ARID1AO14497 2285 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 OR5B21A6NL26 309 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 ANKRD30BLA7E2S9 258 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 B8ZZF3 427 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 PPYP01298 95 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 IFNA21P01568 189 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 HKR1P10072 659 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 ZNF14P17017 642 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-208ENST00000538333 CCL11P51671 97 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 HAGHLQ6PII5 290 aaPredicted RBP11.98□□□□□ -0.49
LIMK1-208ENST00000538333 STPG2Q8N412 459 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 OR5L1Q8NGL2 311 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 OR11L1Q8NGX0 322 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 GLYATL2Q8WU03 294 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 C18orf12Q96KH6 178 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 HIST1H2AAQ96QV6 131 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 OR51B6Q9H340 312 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 TMEM100Q9NV29 134 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 LHX6Q9UPM6 363 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 URB1O60287 2271 aaKnown RBP11.98□□□□□ -0.49
LIMK1-208ENST00000538333 DEDDO75618 318 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 WISP2O76076 250 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 GNG3P63215 75 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 GUSBP1Q15486 140 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 OR2T2Q6IF00 324 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 LIAT1Q6ZQX7 453 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 GALNT11Q8NCW6 608 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 GLRX2Q9NS18 164 aa11.98□□□□□ -0.49
LIMK1-208ENST00000538333 CELA3BP08861 270 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms