RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 IFT22Q9H7X7 185 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 PLEKHA2Q9HB19 425 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 CDH20Q9HBT6 801 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 ASCL3Q9NQ33 180 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 SPRR3Q9UBC9 169 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 CLCF1Q9UBD9 225 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 GLS2Q9UI32 602 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 TUBD1Q9UJT1 453 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 POLDIP2Q9Y2S7 368 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 LIPGQ9Y5X9 500 aa5.71□□□□□ -1.5
USP28-206ENST00000538224 MED13Q9UHV7 2174 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 COL6A3P12111 3177 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 VPS13AQ96RL7 3174 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 TRBV6-6A0A0A6YYG2 114 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.7□□□□□ -1.5
USP28-206ENST00000538224 TMEM210A6NLX4 147 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 A8MXK9 166 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 ZNF732B4DXR9 585 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 TEX46H3BTG2 121 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 ADAP1O75689 374 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 IL18BPO95998 194 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 NAPSAO96009 420 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 TK1P04183 234 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 FGF2P09038 288 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 PI3P19957 117 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 BCL3P20749 454 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 GLRA1P23415 457 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 DUSP1P28562 367 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 OPRM1P35372 400 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 GPM6AP51674 278 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 PIGPP57054 158 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 RND3P61587 244 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 C3AR1Q16581 482 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 IAH1Q2TAA2 248 aaPredicted RBP5.7□□□□□ -1.5
USP28-206ENST00000538224 EIF2S3LQ2VIR3 472 aaKnown RBP5.7□□□□□ -1.5
USP28-206ENST00000538224 DMRTC1Q5HYR2 192 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 FAM122CQ6P4D5 195 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 FIP1L1Q6UN15 594 aaKnown RBP5.7□□□□□ -1.5
USP28-206ENST00000538224 UQCC3Q6UW78 93 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 LIAT1Q6ZQX7 453 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 Q6ZT83 130 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 MDP1Q86V88 176 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 CALHM1Q8IU99 346 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 LGI3Q8N145 548 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 C17orf78Q8N4C9 275 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 OR1S1Q8NH92 325 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 NEK7Q8TDX7 302 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 RNF141Q8WVD5 230 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 HPSE2Q8WWQ2 592 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 RTN4IP1Q8WWV3 396 aaPredicted RBP5.7□□□□□ -1.5
USP28-206ENST00000538224 OR5P3Q8WZ94 311 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 TOMM40LQ969M1 308 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 SLAMF9Q96A28 289 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 WBP1Q96G27 269 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 BOD1Q96IK1 185 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 ABHD14BQ96IU4 210 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 PRRX2Q99811 253 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 HDHD3Q9BSH5 251 aaPredicted RBP5.7□□□□□ -1.5
USP28-206ENST00000538224 RSRP1Q9BUV0 290 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 PIGMQ9H3S5 423 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 C12orf49Q9H741 205 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 OBP2BQ9NPH6 170 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 SLC2A9Q9NRM0 540 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 TREM2Q9NZC2 230 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 PRSS50Q9UI38 385 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 TMED3Q9Y3Q3 217 aa5.7□□□□□ -1.5
USP28-206ENST00000538224 AHCTF1Q8WYP5 2266 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 PCNX2A6NKB5 2137 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 MED12LQ86YW9 2145 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 CNTRLQ7Z7A1 2325 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 FREM1Q5H8C1 2179 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 ZNF407Q9C0G0 2248 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 IGKV1D-8A0A087WSZ0 117 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 RAB19A4D1S5 217 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 PRR33A8MZF0 331 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 E5RGE8 158 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 K7EPK0 472 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 DEGS1O15121 323 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 BET1O15155 118 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 CDS2O95674 445 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 PPYP01298 95 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 GAPDHP04406 335 aaKnown RBP5.69□□□□□ -1.5
USP28-206ENST00000538224 HOXB5P09067 269 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 RAC2P15153 192 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 ZNF14P17017 642 aaPredicted RBP5.69□□□□□ -1.5
USP28-206ENST00000538224 PRKACAP17612 351 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 FCGR2CP31995 323 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 NPBWR2P48146 333 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 FXYD4P59646 89 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 S100A10P60903 97 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 TAGLNQ01995 201 aaKnown RBP5.69□□□□□ -1.5
USP28-206ENST00000538224 IL15RAQ13261 267 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 RAB32Q13637 225 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 TMEM187Q14656 261 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 ZNF169Q14929 603 aaPredicted RBP5.69□□□□□ -1.5
USP28-206ENST00000538224 GUSBP1Q15486 140 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 HIKESHIQ53FT3 197 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 SHEQ5VZ18 495 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 FAM214BQ7L5A3 538 aa5.69□□□□□ -1.5
USP28-206ENST00000538224 BAP18Q8IXM2 172 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms