RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 LINC01587Q99440 93 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 ZNF436Q9C0F3 470 aaPredicted RBP2.93□□□□□ -1.94
PRKDC-208ENST00000536710 VSIRQ9H7M9 311 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 FAM60AQ9NP50 221 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 CFAP45Q9UL16 551 aa2.93□□□□□ -1.94
PRKDC-208ENST00000536710 C14orf166Q9Y224 244 aaKnown RBP2.93□□□□□ -1.94
PRKDC-208ENST00000536710 SCN1AP35498 2009 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 COL1A2P08123 1366 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 A0A1B0GXF2 115 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 SULT1C2O00338 296 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 CDIPTO14735 213 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 SNAP29O95721 258 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 SOD3P08294 240 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 CECR9P0C854 216 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 MLNP12872 115 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 SYT1P21579 422 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 PSMB9P28065 219 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 GTF2H1P32780 548 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 KRTAP10-8P60410 259 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 HBG1P69891 147 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 HBG2P69892 147 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 CD164Q04900 197 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 BIKQ13323 160 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 XRCC4Q13426 336 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 CEACAM21Q3KPI0 293 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 TMEM69Q5SWH9 247 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 MRPL2Q5T653 305 aaKnown RBP2.92□□□□□ -1.94
PRKDC-208ENST00000536710 NXNL2Q5VZ03 156 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 NT5DC3Q86UY8 548 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 ZFP62Q8NB50 900 aaPredicted RBP2.92□□□□□ -1.94
PRKDC-208ENST00000536710 C1orf64Q8NEQ6 169 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 OR8S1Q8NH09 359 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 YIPF5Q969M3 257 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 ATP6V1G3Q96LB4 118 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 SNX24Q9Y343 169 aa2.92□□□□□ -1.94
PRKDC-208ENST00000536710 SETD1AO15047 1707 aaKnown RBP2.91□□□□□ -1.94
PRKDC-208ENST00000536710 A0A1W2PRG6 482 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 PGPA6NDG6 321 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 GOLGA6L4A6NEF3 574 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 RNASEK-C17orf49H0YIS7 233 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.91□□□□□ -1.94
PRKDC-208ENST00000536710 I3L4J1 428 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 M0QXV9 152 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 FFAR1O14842 300 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 FABP7O15540 132 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 SLC2A1P11166 492 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 UGT2B10P36537 528 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 MAGEA6P43360 314 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 OR2B6P58173 313 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 PRDX1Q06830 199 aaKnown RBP2.91□□□□□ -1.94
PRKDC-208ENST00000536710 BAXQ07812 192 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 OR8A1Q8NGG7 326 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 PGLYRP3Q96LB9 341 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 SHANK2-AS3Q9BTD1 123 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 TAPBPLQ9BX59 468 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 SUCNR1Q9BXA5 334 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 LHX5Q9H2C1 402 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 DSN1Q9H410 356 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 TAS2R13Q9NYV9 303 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 ABCB11O95342 1321 aa2.91□□□□□ -1.94
PRKDC-208ENST00000536710 TRAV8-3A0A0A6YYJ7 113 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 GMNCA6NCL1 334 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 IGLL5B9A064 214 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 K7EPK0 472 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 K7ERS5 55 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 ISLRO14498 428 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 SGCEO43556 437 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 TSPOP30536 169 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 ZNF83P51522 516 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 OR4D1Q15615 310 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 CLEC18BQ6UXF7 455 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 MRPL52Q86TS9 123 aaKnown RBP2.9□□□□□ -1.95
PRKDC-208ENST00000536710 SELENOHQ8IZQ5 122 aaKnown RBP2.9□□□□□ -1.95
PRKDC-208ENST00000536710 C17orf78Q8N4C9 275 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 OR4C13Q8NGP0 309 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 CASTOR1Q8WTX7 329 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 CCDC127Q96BQ5 260 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 ANGPTL4Q9BY76 406 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 PLA2G12AQ9BZM1 189 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 METTL8Q9H825 291 aaKnown RBP2.9□□□□□ -1.95
PRKDC-208ENST00000536710 BRWD3Q6RI45 1802 aa2.9□□□□□ -1.95
PRKDC-208ENST00000536710 CRXO43186 299 aaPredicted RBP2.89□□□□□ -1.95
PRKDC-208ENST00000536710 SLC35E2BP0CK96 405 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 RNASE2P10153 161 aaKnown RBP2.89□□□□□ -1.95
PRKDC-208ENST00000536710 SPNP16150 400 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 ELK4P28324 431 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 S100A2P29034 98 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 CBX5P45973 191 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 RAB31Q13636 194 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 OR10J3Q5JRS4 329 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 GLYATQ6IB77 296 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 DGAT2L6Q6ZPD8 337 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 USP50Q70EL3 339 aaPredicted RBP2.89□□□□□ -1.95
PRKDC-208ENST00000536710 DPPA2Q7Z7J5 298 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 CALHM3Q86XJ0 350 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 AMN1Q8IY45 258 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 GATD1Q8NB37 220 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 ACTL9Q8TC94 416 aa2.89□□□□□ -1.95
PRKDC-208ENST00000536710 GTF2H4Q92759 462 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms