RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 CPNE2Q96FN4 548 aaPredicted RBP10.59□□□□□ -0.71
RTN3-207ENST00000536011 HMG20AQ9NP66 347 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 FRRS1LQ9P0K9 344 aa10.59□□□□□ -0.71
RTN3-207ENST00000536011 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.59□□□□□ -0.71
RTN3-207ENST00000536011 DSCAML1Q8TD84 2053 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 IGKV1-9A0A0C4DH69 117 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 MEX3AA1L020 520 aaKnown RBP10.58□□□□□ -0.72
RTN3-207ENST00000536011 MEGF11A6BM72 1044 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 XPNPEP2O43895 674 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 MT-ND2P03891 347 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 DUSP1P28562 367 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 OR3A1P47881 315 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 NPBWR2P48146 333 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 RAB13P51153 203 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 ALDH3A2P51648 485 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 MRPL28Q13084 256 aaKnown RBP10.58□□□□□ -0.72
RTN3-207ENST00000536011 TCF23Q7RTU1 214 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 C16orf82Q7Z2V1 217 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 RTN4RL2Q86UN3 420 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 NDUFA11Q86Y39 141 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 SAXO1Q8IYX7 474 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 DYNAPQ8N1N2 210 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 CHST4Q8NCG5 386 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 OR4F17Q8NGA8 305 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 OR52N4Q8NGI2 321 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 ZNF596Q8TC21 504 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 PYDC1Q8WXC3 89 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 CREB3L1Q96BA8 519 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 OR4F4Q96R69 305 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 SERTAD4Q9NUC0 356 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 IL36RNQ9UBH0 155 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 GSTK1Q9Y2Q3 226 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 HILPDAQ9Y5L2 63 aa10.58□□□□□ -0.72
RTN3-207ENST00000536011 J3QLW9 94 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 J3QRE1 110 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 SIRPB1O00241 398 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 EI24O14681 340 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 MPZL2O60487 215 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 PSPNO60542 156 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 ZNF19P17023 458 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 BRS3P32247 399 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 CEACAM3P40198 252 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 VDAC2P45880 294 aaPredicted RBP10.57□□□□□ -0.72
RTN3-207ENST00000536011 SNU13P55769 128 aaKnown RBP10.57□□□□□ -0.72
RTN3-207ENST00000536011 HEPN1Q6WQI6 88 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 REC114Q7Z4M0 266 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 TPRX1Q8N7U7 411 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 OR13C9Q8NGT0 318 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 HAVCR2Q8TDQ0 301 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 Q96MT0 163 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 INPP5EQ9NRR6 644 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 TAS2R3Q9NYW6 316 aa10.57□□□□□ -0.72
RTN3-207ENST00000536011 TMEM212A6NML5 194 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 KDM4BO94953 1096 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 FADS2O95864 444 aaKnown RBP10.56□□□□□ -0.72
RTN3-207ENST00000536011 OR2H2O95918 312 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 CSN2P05814 226 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 HCKP08631 526 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 CCDC159P0C7I6 412 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 ZNF44P15621 663 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 PTGFRP43088 359 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 NANOS3P60323 173 aaKnown RBP10.56□□□□□ -0.72
RTN3-207ENST00000536011 BDH1Q02338 343 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 ALKBH1Q13686 389 aaKnown RBP10.56□□□□□ -0.72
RTN3-207ENST00000536011 HABP2Q14520 560 aaPredicted RBP10.56□□□□□ -0.72
RTN3-207ENST00000536011 KPNB1Q14974 876 aaKnown RBP10.56□□□□□ -0.72
RTN3-207ENST00000536011 NSUN5P1Q3KNT7 163 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 KPRPQ5T749 579 aaPredicted RBP10.56□□□□□ -0.72
RTN3-207ENST00000536011 CCBE1Q6UXH8 406 aaPredicted RBP10.56□□□□□ -0.72
RTN3-207ENST00000536011 SYS1Q8N2H4 156 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 ABHD12Q8N2K0 398 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 OR4D6Q8NGJ1 314 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 OR5D14Q8NGL3 314 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 CORO2AQ92828 525 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 RFT1Q96AA3 541 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 PELI1Q96FA3 418 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 C4orf36Q96KX1 117 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 COMMD4Q9H0A8 199 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 ZCCHC4Q9H5U6 513 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 DPM3Q9P2X0 92 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 EXOGQ9Y2C4 368 aaKnown RBP10.56□□□□□ -0.72
RTN3-207ENST00000536011 GMPPBQ9Y5P6 360 aa10.56□□□□□ -0.72
RTN3-207ENST00000536011 ODAMA1E959 279 aa10.55□□□□□ -0.72
RTN3-207ENST00000536011 OR4C45A6NMZ5 311 aa10.55□□□□□ -0.72
RTN3-207ENST00000536011 FAM90A22PA8MWA6 464 aa10.55□□□□□ -0.72
RTN3-207ENST00000536011 LEUTXA8MZ59 168 aa10.55□□□□□ -0.72
RTN3-207ENST00000536011 G3V4G9 280 aa10.55□□□□□ -0.72
RTN3-207ENST00000536011 TOR1AO14656 332 aa10.55□□□□□ -0.72
RTN3-207ENST00000536011 SULT1B1O43704 296 aa10.55□□□□□ -0.72
RTN3-207ENST00000536011 ALX3O95076 343 aa10.55□□□□□ -0.72
RTN3-207ENST00000536011 DBTP11182 482 aaKnown RBP10.55□□□□□ -0.72
RTN3-207ENST00000536011 CDK2P24941 298 aa10.55□□□□□ -0.72
RTN3-207ENST00000536011 LMO1P25800 156 aa10.55□□□□□ -0.72
RTN3-207ENST00000536011 GALEQ14376 348 aa10.55□□□□□ -0.72
RTN3-207ENST00000536011 BEAN1Q3B7T3 259 aa10.55□□□□□ -0.72
RTN3-207ENST00000536011 LDLRAD2Q5SZI1 272 aa10.55□□□□□ -0.72
RTN3-207ENST00000536011 SAMD5Q5TGI4 173 aa10.55□□□□□ -0.72
RTN3-207ENST00000536011 PRAMEF5Q5TYX0 476 aa10.55□□□□□ -0.72
RTN3-207ENST00000536011 CCDC144NLQ6NUI1 221 aa10.55□□□□□ -0.72
RTN3-207ENST00000536011 SERPINA12Q8IW75 414 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms