RNA–Protein interactions for RNA: ENST00000535997.6

CHMP1A-202, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2 BASIC

Gene CHMP1A, Length 2,295 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-202ENST00000535997 DIRAS3O95661 229 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 HERV-K104P61576 105 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 FBXW12Q6X9E4 464 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 Q6ZS49 121 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 SLC25A26Q70HW3 274 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 FAM185AQ8N0U4 392 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 COMMD1Q8N668 190 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 KIRREL1Q96J84 757 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 NOSIPQ9Y314 301 aaKnown RBP13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 ZNF175Q9Y473 711 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 FAM157AC9JC47 383 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 LAMTOR5O43504 91 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 DANCRP0C864 163 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 PDCD1Q15116 288 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 SRSF7Q16629 238 aaKnown RBP eCLIP13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 SLC23A3Q6PIS1 610 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 PSMF1Q92530 271 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 GINS3Q9BRX5 216 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 REPIN1Q9BWE0 567 aaKnown RBP13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 LINC00470Q9BZP3 86 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 P4HTMQ9NXG6 502 aa13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 BOKQ9UMX3 212 aaPredicted RBP13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 KLF2Q9Y5W3 355 aaPredicted RBP13.83□□□□□ -0.2
CHMP1A-202ENST00000535997 PHF1O43189 567 aaPredicted RBP13.82□□□□□ -0.2
CHMP1A-202ENST00000535997 PPYP01298 95 aa13.82□□□□□ -0.2
CHMP1A-202ENST00000535997 OR8U9P0C7N5 309 aa13.82□□□□□ -0.2
CHMP1A-202ENST00000535997 GLI4P10075 376 aa13.82□□□□□ -0.2
CHMP1A-202ENST00000535997 SPP1P10451 314 aa13.82□□□□□ -0.2
CHMP1A-202ENST00000535997 AADACP22760 399 aa13.82□□□□□ -0.2
CHMP1A-202ENST00000535997 RFC3P40938 356 aa13.82□□□□□ -0.2
CHMP1A-202ENST00000535997 SRPXP78539 464 aa13.82□□□□□ -0.2
CHMP1A-202ENST00000535997 DAZAP2Q15038 168 aaPredicted RBP13.82□□□□□ -0.2
CHMP1A-202ENST00000535997 HMGN3Q15651 99 aa13.82□□□□□ -0.2
CHMP1A-202ENST00000535997 Q6ZPA2 131 aa13.82□□□□□ -0.2
CHMP1A-202ENST00000535997 OR52M1Q8NGK5 317 aa13.82□□□□□ -0.2
CHMP1A-202ENST00000535997 OR11L1Q8NGX0 322 aa13.82□□□□□ -0.2
CHMP1A-202ENST00000535997 OR8U1Q8NH10 309 aa13.82□□□□□ -0.2
CHMP1A-202ENST00000535997 FAM86C1Q9NVL1 165 aa13.82□□□□□ -0.2
CHMP1A-202ENST00000535997 PINLYPA6NC86 204 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 RPL36A-HNRNPH2H7BZ11 118 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 MPPED1O15442 326 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 TSPAN15O95858 294 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 GLAP06280 429 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 ACP1P24666 158 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 NPBWR2P48146 333 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 RAB5CP51148 216 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 UCP2P55851 309 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 PEA15Q15121 130 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 LINC00518Q8N0U6 118 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 CT55Q8WUE5 264 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 ZPBPQ9BS86 351 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 SAV1Q9H4B6 383 aaPredicted RBP13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 LUZP4Q9P127 313 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 LRFN1Q9P244 771 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 DOCK10Q96BY6 2186 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 C3orf85A0A1B0GTC6 90 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 C9JQL5 133 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 NFYBP25208 207 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 ID4P47928 161 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 GNMTQ14749 295 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 CLEC9AQ6UXN8 241 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 TIPARPQ7Z3E1 657 aaKnown RBP13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 SAXO1Q8IYX7 474 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 WFDC1Q9HC57 220 aa13.81□□□□□ -0.2
CHMP1A-202ENST00000535997 PQLC2LA1A4F0 135 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 CDS2O95674 445 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 PDGFBP01127 241 aaPredicted RBP13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 IGHV3-9P01782 118 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 SNCAP37840 140 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 RAB13P51153 203 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 ARF1P84077 181 aaKnown RBP13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 IGSF11Q5DX21 431 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 SPINK14Q6IE38 97 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 OR4D5Q8NGN0 318 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 BSCL2Q96G97 398 aaPredicted RBP13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 TP53RKQ96S44 253 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 TMEM222Q9H0R3 208 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 LOXL2Q9Y4K0 774 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 KPTNQ9Y664 436 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 C19orf67A6NJJ6 358 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 GNRHRP30968 328 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 SLC35G3Q8N808 338 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 DMBX1Q8NFW5 382 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 EXTL1Q92935 676 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 CDX2Q99626 313 aaPredicted RBP13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 PAPOLGQ9BWT3 736 aaKnown RBP13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 SLC7A10Q9NS82 523 aa13.8□□□□□ -0.2
CHMP1A-202ENST00000535997 TK1P04183 234 aa13.79□□□□□ -0.2
CHMP1A-202ENST00000535997 COX5BP10606 129 aa13.79□□□□□ -0.2
CHMP1A-202ENST00000535997 KCNJ3P48549 501 aa13.79□□□□□ -0.2
CHMP1A-202ENST00000535997 NHLH2Q02577 135 aa13.79□□□□□ -0.2
CHMP1A-202ENST00000535997 OR56B2PQ8NGI1 322 aa13.79□□□□□ -0.2
CHMP1A-202ENST00000535997 AKR1E2Q96JD6 320 aa13.79□□□□□ -0.2
CHMP1A-202ENST00000535997 TMEM56Q96MV1 263 aa13.79□□□□□ -0.2
CHMP1A-202ENST00000535997 FAM173AQ9BQD7 235 aa13.79□□□□□ -0.2
CHMP1A-202ENST00000535997 CACFD1Q9UGQ2 172 aa13.79□□□□□ -0.2
CHMP1A-202ENST00000535997 ZDHHC8Q9ULC8 765 aa13.79□□□□□ -0.2
CHMP1A-202ENST00000535997 TMEM56-RWDD3S4R434 201 aa13.79□□□□□ -0.2
CHMP1A-202ENST00000535997 MEX3AA1L020 520 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms