RNA–Protein interactions for RNA: ENST00000535689.5

SNHG1-202, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-202ENST00000535689 IGF1P05019 195 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 CECR9P0C854 216 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 LYNX1P0DP58 116 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 GFAPP14136 432 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 ZNF44P15621 663 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 IGLL1P15814 213 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 TUBG1P23258 451 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 CRABP2P29373 138 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 IL12AP29459 219 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 FGF9P31371 208 aaPredicted RBP2.35□□□□□ -2.03
SNHG1-202ENST00000535689 CD80P33681 288 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 RPL13AP40429 203 aaKnown RBP2.35□□□□□ -2.03
SNHG1-202ENST00000535689 DAP3P51398 398 aaKnown RBP2.35□□□□□ -2.03
SNHG1-202ENST00000535689 NCBP2P52298 156 aaKnown RBP eCLIP2.35□□□□□ -2.03
SNHG1-202ENST00000535689 KLF3P57682 345 aaPredicted RBP2.35□□□□□ -2.03
SNHG1-202ENST00000535689 OR2B6P58173 313 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 C2orf80Q0P641 193 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 PJVKQ0ZLH3 352 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 SNTB2Q13425 540 aaKnown RBP2.35□□□□□ -2.03
SNHG1-202ENST00000535689 CHI3L2Q15782 390 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 TMEM155Q4W5P6 130 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 FBXO48Q5FWF7 155 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 OTPQ5XKR4 325 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 COMMD6Q7Z4G1 85 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 DPPA2Q7Z7J5 298 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 VRK2Q86Y07 508 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 OR2L13Q8N349 312 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 TMEM252Q8N6L7 170 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 OR2T33Q8NG76 320 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 ZNF563Q8TA94 476 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 SYNPRQ8TBG9 265 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 CCL17Q92583 94 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 RPL3LQ92901 407 aaKnown RBP2.35□□□□□ -2.03
SNHG1-202ENST00000535689 AURKBQ96GD4 344 aaPredicted RBP2.35□□□□□ -2.03
SNHG1-202ENST00000535689 VSIG2Q96IQ7 327 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 RBM14Q96PK6 669 aaKnown RBP2.35□□□□□ -2.03
SNHG1-202ENST00000535689 IL4I1Q96RQ9 567 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 STACQ99469 402 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 ERP44Q9BS26 406 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 TAPBPLQ9BX59 468 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 LINC00470Q9BZP3 86 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 TPK1Q9H3S4 243 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 RHOJQ9H4E5 214 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 SLC25A22Q9H936 323 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 PATZ1Q9HBE1 687 aaKnown RBP2.35□□□□□ -2.03
SNHG1-202ENST00000535689 TUBG2Q9NRH3 451 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 ACER3Q9NUN7 267 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 TAAR3PQ9P1P4 343 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 ONECUT1Q9UBC0 465 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 Q9UF83 564 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 OR5V1Q9UGF6 321 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 OPN4Q9UHM6 478 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 ZNF221Q9UK13 617 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 RASD1Q9Y272 281 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 STK38LQ9Y2H1 464 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 RRP15Q9Y3B9 282 aaKnown RBP2.35□□□□□ -2.03
SNHG1-202ENST00000535689 NPTNQ9Y639 398 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 USH1CQ9Y6N9 552 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 U3KQK5 164 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 TANC2Q9HCD6 1990 aa2.35□□□□□ -2.03
SNHG1-202ENST00000535689 IGHV2OR16-5A0A0B4J2B6 119 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 LOC100131303A0A0U1RQF7 123 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 KIR2DS1A0A191URI9 304 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 A0A1B0GWB2 263 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 ZNF716A6NP11 495 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 H3BMQ9 156 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 H3BQF6 201 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 RPL36A-HNRNPH2H7BZ11 118 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 UPK1AO00322 258 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 DYNC1I1O14576 645 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 RS1O15537 224 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 ZNF208O43345 1280 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 RAMP3O60896 148 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 SMIM24O75264 130 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 ZNF254O75437 659 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 KCNK2O95069 426 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 RAB36O95755 333 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 RBP1P09455 135 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 OR8U8P0C7N1 319 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 ZNF250P15622 560 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 TCN1P20061 433 aaPredicted RBP2.34□□□□□ -2.03
SNHG1-202ENST00000535689 ANP32AP39687 249 aaKnown RBP2.34□□□□□ -2.03
SNHG1-202ENST00000535689 MAGEA3P43357 314 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 KIR2DS4P43632 304 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 TAS2R39P59534 338 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 KRTAP10-5P60370 271 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 KRTAP10-12P60413 245 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 NAA20P61599 178 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 GNB2P62879 340 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 SLC35A2P78381 396 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 CCL8P80075 99 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 H3F3AP84243 136 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 MERTKQ12866 999 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 GNA13Q14344 377 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 QPRTQ15274 297 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 PPP1R7Q15435 360 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 KCNJ8Q15842 424 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 TRIM16LQ309B1 348 aa2.34□□□□□ -2.03
SNHG1-202ENST00000535689 C18orf21Q32NC0 220 aaPredicted RBP2.34□□□□□ -2.03
SNHG1-202ENST00000535689 GGTA1PQ4G0N0 100 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms