RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 HMG20AQ9NP66 347 aa8.93□□□□□ -0.98
CLSTN3-206ENST00000535668 PCDHB16Q9NRJ7 776 aa8.93□□□□□ -0.98
CLSTN3-206ENST00000535668 ZMAT5Q9UDW3 170 aaKnown RBP8.93□□□□□ -0.98
CLSTN3-206ENST00000535668 IGKV1-9A0A0C4DH69 117 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 BUB1B-PAK6H3BSN5 160 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 SYT7O43581 403 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 PEX14O75381 377 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 MMP23AO75900 390 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 KDM4BO94953 1096 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 IGHA1P01876 353 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 RPSAP08865 295 aaKnown RBP8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 MRPL3P09001 348 aaKnown RBP8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 PIPP12273 146 aaPredicted RBP8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 PRKACBP22694 351 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 HTR1FP30939 366 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 CEACAM3P40198 252 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 CCR9P51686 369 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 EDDM3BP56851 147 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 KRTAP10-11P60412 298 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 SLC34A1Q06495 639 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 PDZK1IP1Q13113 114 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 GRK1Q15835 563 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 HLA-DRB5Q30154 266 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 CCDC144NLQ6NUI1 221 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 SLC16A12Q6ZSM3 486 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 LYG1Q8N1E2 194 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 ABHD12Q8N2K0 398 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 OSR2Q8N2R0 312 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 Q8NFD4 153 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 OR4X2Q8NGF9 303 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 MYDGFQ969H8 173 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 CCDC124Q96CT7 223 aaKnown RBP8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 BORCS8Q96FH0 119 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 ZFP57Q9NU63 452 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 H2AFY2Q9P0M6 372 aaPredicted RBP8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 GLS2Q9UI32 602 aa8.92□□□□□ -0.98
CLSTN3-206ENST00000535668 A0A1W2PQL4 384 aaPredicted RBP8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 E9PQ18 207 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 J3QRE1 110 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 FGF16O43320 207 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 EPHA2P29317 976 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 ATP1B3P54709 279 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 EBI3Q14213 229 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 FLOT2Q14254 428 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 TMEM244Q5VVB8 128 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 ELP2Q6IA86 826 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 ETV3LQ6ZN32 361 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 PLEKHG7Q6ZR37 379 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 SSX6Q7RTT6 188 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 CENPVQ7Z7K6 275 aaPredicted RBP8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 PRSS35Q8N3Z0 413 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 COMMD1Q8N668 190 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 TCEANCQ8N8B7 351 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 RNF152Q8N8N0 203 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 OR8J1Q8NGP2 316 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 TRUB1Q8WWH5 349 aaKnown RBP8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 P2RX4Q99571 388 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 THTPAQ9BU02 230 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 MCRIP2Q9BUT9 160 aaKnown RBP8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 PLEKHA1Q9HB21 404 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 ZNF580Q9UK33 172 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 POMPQ9Y244 141 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 HILPDAQ9Y5L2 63 aa8.91□□□□□ -0.98
CLSTN3-206ENST00000535668 TRGV10A0A0A0MS01 117 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 FAM230AA0A1W2PPH8 454 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 TCRBV4S1A1TA0A5B7 111 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 SH2D1BO14796 132 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 MAGEB4O15481 346 aaPredicted RBP8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 CLIC3O95833 236 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 CYB5AP00167 134 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 NHLRC4P0CG21 123 aaPredicted RBP8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 PF4V1P10720 104 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 JUNBP17275 347 aaPredicted RBP8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 NPBWR2P48146 333 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 GP2P55259 537 aaKnown RBP8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 DYNC1I2Q13409 638 aaKnown RBP8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 ATP6AP1Q15904 470 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 TMEM95Q3KNT9 176 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 TPTE2P1Q5T6R2 138 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 Q6P435 159 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 LHFPL2Q6ZUX7 228 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 MRPL41Q8IXM3 137 aaKnown RBP8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 OR10A7Q8NGE5 316 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 NDNFQ8TB73 568 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 EMG1Q92979 244 aaKnown RBP8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 SLAMF9Q96A28 289 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 SLC7A6OSQ96CW6 309 aaPredicted RBP8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 WWC2-AS2Q96NR7 200 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 SLC25A33Q9BSK2 321 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 GABARAPL3Q9BY60 117 aa8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 RBFOX1Q9NWB1 397 aaKnown RBP8.9□□□□□ -0.98
CLSTN3-206ENST00000535668 IGKV1-12A0A0C4DH73 117 aa8.89□□□□□ -0.99
CLSTN3-206ENST00000535668 KBTBD11-OT1A0A1B0GTJ5 212 aa8.89□□□□□ -0.99
CLSTN3-206ENST00000535668 LOC107986453A0A1B0GWG9 222 aa8.89□□□□□ -0.99
CLSTN3-206ENST00000535668 WI2-2373I1.2A0A1W2PRP0 233 aa8.89□□□□□ -0.99
CLSTN3-206ENST00000535668 ODAMA1E959 279 aa8.89□□□□□ -0.99
CLSTN3-206ENST00000535668 ZNF729A6NN14 1252 aaPredicted RBP8.89□□□□□ -0.99
CLSTN3-206ENST00000535668 NPIPB11E5RHQ5 1161 aa8.89□□□□□ -0.99
CLSTN3-206ENST00000535668 GYG2O15488 501 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms