RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 ANKRD39Q53RE8 183 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 GLYATL3Q5SZD4 288 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 DRAM2Q6UX65 266 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 NLRC3Q7RTR2 1065 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 KLBQ86Z14 1044 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 FTMTQ8N4E7 242 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 IQCF1Q8N6M8 205 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 ZNF454Q8N9F8 522 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 ZNF511Q8NB15 262 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 OR8B3Q8NGG8 313 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 OR11L1Q8NGX0 322 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 FAM216AQ8WUB2 273 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 DVL3Q92997 716 aaPredicted RBP7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 SLAMF6Q96DU3 332 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 OR2A7Q96R45 310 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 OR8B2Q96RD0 313 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 FEVQ99581 238 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 NIPSNAP1Q9BPW8 284 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 ADAT1Q9BUB4 502 aaKnown RBP7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 OPA3Q9H6K4 179 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 TCF7L1Q9HCS4 588 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 MIOXQ9UGB7 285 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 POLR3KQ9Y2Y1 108 aaPredicted RBP7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 PPIAL4AQ9Y536 164 aa7.15□□□□□ -1.26
SFSWAP-202ENST00000535202 ANK2Q01484 3957 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 C5orf63A6NC05 138 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 NAP1L6A6NFF2 107 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 RIIAD1A6NNX1 92 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 MCRIP1C9JLW8 97 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 ZNF878C9JN71 531 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 G3V3Q6 166 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 H3BN98 237 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 ZNF593O00488 134 aaPredicted RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 GSTZ1O43708 216 aaPredicted RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 ATG12O94817 140 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 PLATP00750 562 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 RLN2P04090 185 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 TCRBP04435 133 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 ACAA1P09110 424 aaPredicted RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 RAB3BP20337 219 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 PVALBP20472 110 aaPredicted RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 NFYAP23511 347 aaPredicted RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 S100A11P31949 105 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 OTX1P32242 354 aaPredicted RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 BTCP35070 178 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 CD200P41217 278 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 GATA4P43694 442 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 SLC25A1P53007 311 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 CD81P60033 236 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 RAB5BP61020 215 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 TSPAN5P62079 268 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 PITPNAQ00169 270 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 EIF2B1Q14232 305 aaKnown RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 MPPED2Q15777 294 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 C10orf91Q5T1B1 145 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 BTNL3Q6UXE8 466 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 RBMS3Q6XE24 437 aaKnown RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 C17orf107Q6ZR85 190 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 SIGLECL1Q8N7X8 197 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 ZDHHC22Q8N966 263 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 ZNF565Q8N9K5 539 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 BOLLQ8N9W6 283 aaKnown RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 OR56B2PQ8NGI1 322 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 OR2T35Q8NGX2 323 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 OR6N2Q8NGY6 317 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 OR1S1Q8NH92 325 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 GCDHQ92947 438 aaPredicted RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 ERGIC1Q969X5 290 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 NEIL1Q96FI4 390 aaPredicted RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 PAPOLGQ9BWT3 736 aaKnown RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 NMNAT2Q9BZQ4 307 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 MS4A7Q9GZW8 240 aaPredicted RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 ALX4Q9H161 411 aaPredicted RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 ABCG5Q9H222 651 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 MED20Q9H944 212 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 FN3KRPQ9HA64 309 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 FGF20Q9NP95 211 aaPredicted RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 ESM1Q9NQ30 184 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 ZNF69Q9UC07 566 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 SF3B6Q9Y3B4 125 aaKnown RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 NOP16Q9Y3C1 178 aaKnown RBP7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 STAB1Q9NY15 2570 aa7.14□□□□□ -1.27
SFSWAP-202ENST00000535202 DOCK11Q5JSL3 2073 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 FBN3Q75N90 2809 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 IGHV3OR16-10A0A075B7F0 116 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 IGHV2-70DA0A0C4DH43 119 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 FAM74A7A6NL05 159 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 FAM183AA6NL82 134 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 A6NLC8 198 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 SNRPGP15A8MWD9 76 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 CTDSPLO15194 276 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 NUPL2O15504 423 aaKnown RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 XRCC2O43543 280 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 HPGDSO60760 199 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 TMEM127O75204 238 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 EIF3GO75821 320 aaKnown RBP eCLIP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 APOC3P02656 99 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 IL5P05113 134 aa7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 ANXA2P07355 339 aaKnown RBP7.13□□□□□ -1.27
SFSWAP-202ENST00000535202 UBBP0CG47 229 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms