RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 YIPF3Q9GZM5 350 aa8.32□□□□□ -1.08
TM9SF1-210ENST00000530563 TAS2R3Q9NYW6 316 aa8.32□□□□□ -1.08
TM9SF1-210ENST00000530563 LAMP5Q9UJQ1 280 aa8.32□□□□□ -1.08
TM9SF1-210ENST00000530563 COPS3Q9UNS2 423 aa8.32□□□□□ -1.08
TM9SF1-210ENST00000530563 SLC7A11Q9UPY5 501 aa8.32□□□□□ -1.08
TM9SF1-210ENST00000530563 FAM230AA0A1W2PPH8 454 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 DHRS7CA6NNS2 312 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 ENTPD6O75354 484 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 ZNF254O75437 659 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 E2F6O75461 281 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 MNDAP41218 407 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 GLIPR1P48060 266 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 VEGFCP49767 419 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 INSL3P51460 131 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 FOXE3Q13461 319 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 KIAA0141Q14154 515 aaPredicted RBP8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 EBI3Q14213 229 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 HNF4GQ14541 408 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 C17orf58Q2M2W7 97 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 SLC35D3Q5M8T2 416 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 SLX4IPQ5VYV7 408 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 CCDC144NLQ6NUI1 221 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 SLC25A26Q70HW3 274 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 TRAPPC6BQ86SZ2 158 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 ELMOD2Q8IZ81 293 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 TRMT10AQ8TBZ6 339 aaKnown RBP8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 MYOZ3Q8TDC0 251 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 MROQ9BYG7 248 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 GAL3ST2Q9H3Q3 398 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 RBFOX1Q9NWB1 397 aaKnown RBP8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 KIAA1109Q2LD37 5005 aa8.31□□□□□ -1.08
TM9SF1-210ENST00000530563 TRGV10A0A0A0MS01 117 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 TOR1AO14656 332 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 MAGEB4O15481 346 aaPredicted RBP8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 CCDC22O60826 627 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 LY86O95711 162 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 ELANEP08246 267 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 CALCBP10092 127 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 TMEM11P17152 192 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 CCL1P22362 96 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 GPR12P47775 334 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 PRRX1P54821 245 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 GPR50Q13585 617 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 GINS1Q14691 196 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 FOXRED2Q8IWF2 684 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 Q8N6K4 173 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 TEX47Q8TBZ9 253 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 EMG1Q92979 244 aaKnown RBP8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 COQ2Q96H96 371 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 FEVQ99581 238 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 ZMAT4Q9H898 229 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 PLSCR3Q9NRY6 295 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 KMT2AQ03164 3969 aa8.3□□□□□ -1.08
TM9SF1-210ENST00000530563 HECTD4Q9Y4D8 3996 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 TRBV2A0A0J9YWF9 115 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 CCDC182A6NF36 153 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 TRIM64CA6NLI5 447 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 AP4M1O00189 453 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 IGHG4P01861 327 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 RIDAP52758 137 aaKnown RBP8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 CDK5Q00535 292 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 AESQ08117 197 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 RBM39Q14498 530 aaKnown RBP8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 ZNF829Q3KNS6 432 aaPredicted RBP8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 CXorf66Q5JRM2 361 aaPredicted RBP8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 C16orf89Q6UX73 402 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 ENTHD1Q8IYW4 607 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 FAM58AQ8N1B3 248 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 OR11H1Q8NG94 326 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 C4orf3Q8WVX3 66 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 KIRREL1Q96J84 757 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 APOL4Q9BPW4 351 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 TTTY10Q9BZA0 68 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 ABCG5Q9H222 651 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 PCDHB16Q9NRJ7 776 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 OR52A1Q9UKL2 312 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 SIRT4Q9Y6E7 314 aaPredicted RBP8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 R4GMQ9 66 aa8.29□□□□□ -1.08
TM9SF1-210ENST00000530563 TCRBV5S2A0A599 114 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 ODAMA1E959 279 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 H3BN98 237 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 I3L521 148 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 J3QR06 171 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 SIRPB1O00241 398 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 OR2H2O95918 312 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 IGKV1D-33P01593 117 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 IGKV1-33P01594 117 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 MRPL3P09001 348 aaKnown RBP8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 SPNP16150 400 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 BCL3P20749 454 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 ATP6V1B2P21281 511 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 PSMB8P28062 276 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 PTGFRP43088 359 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 FUT6P51993 359 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 CDC42P60953 191 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 APOFQ13790 326 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 KPNB1Q14974 876 aaKnown RBP8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 SPIN3Q5JUX0 258 aa8.28□□□□□ -1.08
TM9SF1-210ENST00000530563 BCL2L15Q5TBC7 163 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms