RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 GALEQ14376 348 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 SNAPC1Q16533 368 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 ZNF674Q2M3X9 581 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 COQ5Q5HYK3 327 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 LCE4AQ5TA78 99 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 PIGWQ7Z7B1 504 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 PRR18Q8N4B5 295 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 RNF148Q8N7C7 305 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 OR52L1Q8NGH7 329 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 OR4P4Q8NGL7 312 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 OR4Q3Q8NH05 313 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 ZNF671Q8TAW3 534 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 AKR1E2Q96JD6 320 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 ZNF714Q96N38 554 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 CITED4Q96RK1 184 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 INTS14Q96SY0 518 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 KCTD14Q9BQ13 255 aaPredicted RBP2.78□□□□□ -1.96
PTPRC-213ENST00000529828 TTTY10Q9BZA0 68 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 CHST6Q9GZX3 395 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 CCDC134Q9H6E4 229 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 LIN7BQ9HAP6 207 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 SAR1AQ9NR31 198 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 GPR173Q9NS66 373 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 INTS9Q9NV88 658 aaKnown RBP2.78□□□□□ -1.96
PTPRC-213ENST00000529828 ARMC1Q9NVT9 282 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 SLC22A13Q9Y226 551 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 KLHDC2Q9Y2U9 406 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 CDH10Q9Y6N8 788 aa2.78□□□□□ -1.96
PTPRC-213ENST00000529828 A0A087X0M5 115 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 A0A1B0GX30 115 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 TMEM82A0PJX8 343 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 SERPINE3A8MV23 424 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 F8VVB4 439 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 F8VWA3 439 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 H3BSH0 61 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 J3QT63 122 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 CCL24O00175 119 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 SELENOFO60613 162 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 EDF1O60869 148 aaKnown RBP2.77□□□□□ -1.97
PTPRC-213ENST00000529828 RPLP1P05386 114 aaKnown RBP2.77□□□□□ -1.97
PTPRC-213ENST00000529828 GSTT2P0CG29 244 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 GSTT2BP0CG30 244 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 CALCBP10092 127 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 HTR1DP28221 377 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 CHATP28329 748 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 RRM2P31350 389 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 GSSP48637 474 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 SNU13P55769 128 aaKnown RBP2.77□□□□□ -1.97
PTPRC-213ENST00000529828 PPP1R8Q12972 351 aaKnown RBP2.77□□□□□ -1.97
PTPRC-213ENST00000529828 RIPK1Q13546 671 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 RBM39Q14498 530 aaKnown RBP2.77□□□□□ -1.97
PTPRC-213ENST00000529828 HNF4GQ14541 408 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 CEACAM21Q3KPI0 293 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF260Q3ZCT1 412 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 UTF1Q5T230 341 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 LINC01590Q5TEZ4 76 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 MINOS1Q5TGZ0 78 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 FDX2Q6P4F2 183 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 C16orf89Q6UX73 402 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 ASRGL1Q7L266 308 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 GDPD3Q7L5L3 318 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 C16orf82Q7Z2V1 217 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 TRAPPC6BQ86SZ2 158 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 ANGPTL5Q86XS5 388 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.77□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF695Q8IW36 515 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 IQCF1Q8N6M8 205 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 TRMT10AQ8TBZ6 339 aaKnown RBP2.77□□□□□ -1.97
PTPRC-213ENST00000529828 GNPDA2Q8TDQ7 276 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 THEM6Q8WUY1 208 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 NRIP2Q9BQI9 281 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 TSSK6Q9BXA6 273 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 CLEC7AQ9BXN2 247 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 TMEM133Q9H2Q1 129 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 RGCCQ9H4X1 137 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 NIPAL2Q9H841 368 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 ABCB9Q9NP78 766 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 VNN3Q9NY84 501 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 IL36RNQ9UBH0 155 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 SCOCQ9UIL1 159 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 PIGLQ9Y2B2 252 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF256Q9Y2P7 627 aaPredicted RBP2.77□□□□□ -1.97
PTPRC-213ENST00000529828 SMAD5-AS1Q9Y6J3 95 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 MINOS1-NBL1R4GNA1 71 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 A6NHS1 94 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 OR5B21A6NL26 309 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 LINC01548A6NM66 108 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 NOTOA8MTQ0 251 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 H3BUI4 141 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 K7N7A8 449 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 GATCO43716 136 aaKnown RBP2.77□□□□□ -1.97
PTPRC-213ENST00000529828 ZNF737O75373 536 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 IGHV3-7P01780 117 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 APOC1P02654 83 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 GLAP06280 429 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 LYNP07948 512 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 FRMD6-AS1P0C7T7 363 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 GALP22466 123 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 GABRR1P24046 479 aa2.77□□□□□ -1.97
PTPRC-213ENST00000529828 DUSP1P28562 367 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms