RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 PHYHO14832 338 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 MYL12BO14950 172 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 RBFOX2O43251 390 aaKnown RBP eCLIP2.72□□□□□ -1.97
C11orf88-204ENST00000529661 TGOLN2O43493 480 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 ZNF189O75820 626 aaPredicted RBP2.72□□□□□ -1.97
C11orf88-204ENST00000529661 VAMP5O95183 116 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 ATP6V1G2O95670 118 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 ASS1P00966 412 aaKnown RBP2.72□□□□□ -1.97
C11orf88-204ENST00000529661 ISG15P05161 165 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 ADRA2AP08913 450 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 ZNF688P0C7X2 276 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 F8A1P23610 371 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 PAX6P26367 422 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 HSD11B1P28845 292 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 TALDO1P37837 337 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 OPRK1P41145 380 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 CXCL12P48061 93 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 GDI2P50395 445 aaKnown RBP2.72□□□□□ -1.97
C11orf88-204ENST00000529661 AP2S1P53680 142 aaPredicted RBP2.72□□□□□ -1.97
C11orf88-204ENST00000529661 CLDN12P56749 244 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 ARF6P62330 175 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 CCL7P80098 99 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 RBMY1FQ15415 496 aaKnown RBP2.72□□□□□ -1.97
C11orf88-204ENST00000529661 TTC32Q5I0X7 151 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 CLVS2Q5SYC1 327 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 SAXO2Q658L1 398 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 BLIDQ8IZY5 108 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 OR52E4Q8NGH9 312 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 OR52P1PQ8NH57 321 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 OR1S1Q8NH92 325 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 PIGXQ8TBF5 258 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 HGDQ93099 445 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 NEURL3Q96EH8 262 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 KCTD7Q96MP8 289 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 STACQ99469 402 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 EMC6Q9BV81 110 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 MRPS26Q9BYN8 205 aaKnown RBP2.72□□□□□ -1.97
C11orf88-204ENST00000529661 EXOSC4Q9NPD3 245 aaKnown RBP2.72□□□□□ -1.97
C11orf88-204ENST00000529661 GUCA1BQ9UMX6 200 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 TP53TG1Q9Y2A0 90 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 ZNF608Q9ULD9 1512 aaPredicted RBP2.72□□□□□ -1.97
C11orf88-204ENST00000529661 ADGRL3Q9HAR2 1447 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 IGHV3-72A0A0B4J1Y9 119 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 TINCRA0A1B0GVN0 87 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 A0A1W2PQL4 384 aaPredicted RBP2.71□□□□□ -1.98
C11orf88-204ENST00000529661 C21orf140B9A014 251 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 PSPHP1O15172 72 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 ACOX3O15254 700 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 IGKV1D-16P01601 117 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 TRBV12-3P01733 135 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 CD74P04233 296 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 CDK1P06493 297 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 PSMB9P28065 219 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 TSPOP30536 169 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 GCLMP48507 274 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 ERFP50548 548 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 ERVS71-1P61550 626 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 GLO1Q04760 184 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 CYP24A1Q07973 514 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 INCA1Q0VD86 236 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 CDC20Q12834 499 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 EIF4EBP1Q13541 118 aaPredicted RBP2.71□□□□□ -1.98
C11orf88-204ENST00000529661 CASP8Q14790 479 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 PRSS8Q16651 343 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 CLEC12BQ2HXU8 276 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 LRRC26Q2I0M4 334 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 ACSM3Q53FZ2 586 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 RNASE13Q5GAN3 156 aaKnown RBP2.71□□□□□ -1.98
C11orf88-204ENST00000529661 HHATQ5VTY9 493 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 CD200R1LQ6Q8B3 271 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 RTL4Q6ZR62 310 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 FAM19A5Q7Z5A7 132 aaPredicted RBP2.71□□□□□ -1.98
C11orf88-204ENST00000529661 C10orf107Q8IVU9 208 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 LGI3Q8N145 548 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 STOML3Q8TAV4 291 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 CIRBP-AS1Q8TBR5 109 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 FRZBQ92765 325 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 RERGQ96A58 199 aaPredicted RBP2.71□□□□□ -1.98
C11orf88-204ENST00000529661 STARD4Q96DR4 205 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 Q96MT0 163 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 BIRC8Q96P09 236 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 OR2M4Q96R27 311 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 PITX2Q99697 317 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 TMED9Q9BVK6 235 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 DIABLOQ9NR28 239 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 RBFOX1Q9NWB1 397 aaKnown RBP2.71□□□□□ -1.98
C11orf88-204ENST00000529661 IL37Q9NZH6 218 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 OPN4Q9UHM6 478 aa2.71□□□□□ -1.98
C11orf88-204ENST00000529661 NDRG2Q9UN36 371 aaKnown RBP2.71□□□□□ -1.98
C11orf88-204ENST00000529661 CHD2O14647 1828 aaKnown RBP2.7□□□□□ -1.98
C11orf88-204ENST00000529661 RIMS2Q9UQ26 1411 aa2.7□□□□□ -1.98
C11orf88-204ENST00000529661 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.7□□□□□ -1.98
C11orf88-204ENST00000529661 CXCR6O00574 342 aa2.7□□□□□ -1.98
C11orf88-204ENST00000529661 PFDN6O15212 129 aa2.7□□□□□ -1.98
C11orf88-204ENST00000529661 CHST10O43529 356 aa2.7□□□□□ -1.98
C11orf88-204ENST00000529661 LYPLA2O95372 231 aa2.7□□□□□ -1.98
C11orf88-204ENST00000529661 CALB1P05937 261 aa2.7□□□□□ -1.98
C11orf88-204ENST00000529661 RPS17P08708 135 aaKnown RBP2.7□□□□□ -1.98
C11orf88-204ENST00000529661 LINC00869P0C866 280 aa2.7□□□□□ -1.98
C11orf88-204ENST00000529661 MUC1P15941 1255 aaPredicted RBP2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms