RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 NTN4Q9HB63 628 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 TMBIM4Q9HC24 238 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 FAM212BQ9NTI7 297 aaPredicted RBP3.6□□□□□ -1.83
CSDE1-212ENST00000529046 TMEM38BQ9NVV0 291 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 CCDC167Q9P0B6 97 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 ANGPT4Q9Y264 503 aa3.6□□□□□ -1.83
CSDE1-212ENST00000529046 A0A0G2JMP0 313 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 A0A0X1KG70 313 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 A0A1B0GWJ7 208 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 A0A1W2PRG6 482 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 CLDN25C9JDP6 229 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 LYNX1G3V0Z9 82 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 ARPC1BO15143 372 aaKnown RBP3.59□□□□□ -1.83
CSDE1-212ENST00000529046 PPIHO43447 177 aaKnown RBP3.59□□□□□ -1.83
CSDE1-212ENST00000529046 IFNA14P01570 189 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 IGHV2-5P01817 119 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 THY1P04216 161 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 LYNX1P0DP58 116 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 COX5BP10606 129 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 GZMMP51124 257 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 DAP3P51398 398 aaKnown RBP3.59□□□□□ -1.83
CSDE1-212ENST00000529046 UGT2B15P54855 530 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 AQP5P55064 265 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 BIDP55957 195 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 TBC1D28Q2M2D7 210 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 C17orf58Q2M2W7 97 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 COQ5Q5HYK3 327 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 ZNF506Q5JVG8 444 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 BEND6Q5SZJ8 279 aaPredicted RBP3.59□□□□□ -1.83
CSDE1-212ENST00000529046 THEM4Q5T1C6 240 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 AGBL2Q5U5Z8 902 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 TMEM53Q6P2H8 277 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 SLC16A14Q7RTX9 510 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 LRP11Q86VZ4 500 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 WDFY1Q8IWB7 410 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 SLC30A7Q8NEW0 376 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 OR4M2Q8NGB6 313 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 OR56B2PQ8NGI1 322 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 OR52M1Q8NGK5 317 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 OR6T1Q8NGN1 323 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 RAB1CQ92928 201 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 POP5Q969H6 163 aaKnown RBP3.59□□□□□ -1.83
CSDE1-212ENST00000529046 YIPF5Q969M3 257 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 MCHR2Q969V1 340 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 TIMD4Q96H15 378 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 CGREF1Q99674 301 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 PRSS27Q9BQR3 290 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 WFDC6Q9BQY6 131 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 TPPP3Q9BW30 176 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 SUCNR1Q9BXA5 334 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 PLA2G12AQ9BZM1 189 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 CENPHQ9H3R5 247 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 TPK1Q9H3S4 243 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 IKZF5Q9H5V7 419 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 PALMDQ9NP74 551 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 MEPEQ9NQ76 525 aaPredicted RBP3.59□□□□□ -1.83
CSDE1-212ENST00000529046 TAAR3PQ9P1P4 343 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 EIF3KQ9UBQ5 218 aaKnown RBP3.59□□□□□ -1.83
CSDE1-212ENST00000529046 NDUFAF1Q9Y375 327 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 AUP1Q9Y679 476 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 U3KQV3 271 aa3.59□□□□□ -1.83
CSDE1-212ENST00000529046 ERICH4A6NGS2 130 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 FOXI3A8MTJ6 420 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-212ENST00000529046 LRRN3E7EW58 273 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 C11orf98E9PRG8 122 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 F8WDY8 70 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 BOLA2-SMG1P6H3BVE0 249 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 CLDN34H7C241 214 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 RNF13O43567 381 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 SCGB2A1O75556 95 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 FOXH1O75593 365 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 OR7A10O76100 309 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 OR5F1O95221 314 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 MPZL1O95297 269 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 IGHMP01871 453 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 FCER2P06734 321 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 CST2P09228 141 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 FUT1P19526 365 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 TCN1P20061 433 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-212ENST00000529046 STOMP27105 288 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 APLNRP35414 380 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 PCBD1P61457 104 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 CCL8P80075 99 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 RPL18Q07020 188 aaKnown RBP3.58□□□□□ -1.84
CSDE1-212ENST00000529046 P2RY14Q15391 338 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 TMEM155Q4W5P6 130 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 LRRC23Q53EV4 343 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-212ENST00000529046 AGKQ53H12 422 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 LINC00242Q5T6M2 205 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 CARD17Q5XLA6 110 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 FAHD2BQ6P2I3 314 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-212ENST00000529046 ERICH5Q6P6B1 374 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 ARL9Q6T311 187 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 Q6ZR54 194 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 Q6ZRG5 221 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 DHDDSQ86SQ9 333 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 SLC25A42Q86VD7 318 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 LRRC28Q86X40 367 aaPredicted RBP3.58□□□□□ -1.84
CSDE1-212ENST00000529046 CALHM3Q86XJ0 350 aa3.58□□□□□ -1.84
CSDE1-212ENST00000529046 PARP8Q8N3A8 854 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms