RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 ZNF610Q8N9Z0 462 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 NAXEQ8NCW5 288 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 SLC25A40Q8TBP6 338 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 WDR89Q96FK6 387 aaPredicted RBP12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 OR2J1Q9GZK6 312 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 TMEM100Q9NV29 134 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 ZNF629Q9UEG4 869 aaPredicted RBP12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 MEMO1Q9Y316 297 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 FAM186AA6NE01 2351 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 TRAV14DV4A0A0A6YYC5 116 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 CRYM-AS1A6NIL9 109 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 OR5H1A6NKK0 313 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 WISP2O76076 250 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 SLC34A2O95436 690 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 MPC2O95563 127 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 DIRAS3O95661 229 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 CELA3BP08861 270 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 ZNF728P0DKX0 622 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 PRKACAP17612 351 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 KITLGP21583 273 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 PSMB6P28072 239 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 SERPINF1P36955 418 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 SUPT4H1P63272 117 aaKnown RBP12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 FOXF2Q12947 444 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 ZNF718Q3SXZ3 478 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 CLLU1Q5K131 121 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 FIP1L1Q6UN15 594 aaKnown RBP12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 SLC51BQ86UW2 128 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 CXorf67Q86X51 503 aaPredicted RBP12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 CCDC71LQ8N9Z2 235 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 BHLHE23Q8NDY6 225 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 OR8G5Q8NG78 346 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 FAM57AQ8TBR7 257 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 MOB3AQ96BX8 217 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 MARS2Q96GW9 593 aaKnown RBP12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 USB1Q9BQ65 265 aaKnown RBP12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 SFXN3Q9BWM7 321 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 ARL6Q9H0F7 186 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 Q9N2K0 584 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 CRIM1Q9NZV1 1036 aa12.62□□□□□ -0.39
ECHDC1-220ENST00000528402 TEX13DA0A0J9YY54 714 aaPredicted RBP12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 LINC00862A6NCI5 91 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 FAM25EA8MYX2 175 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 SYNGR1O43759 233 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 NOS1APO75052 506 aaPredicted RBP12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 PET100P0DJ07 73 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 RPS2P15880 293 aaKnown RBP12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 FCGR2CP31995 323 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 EXOSC2Q13868 293 aaKnown RBP12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 DAZAP2Q15038 168 aaPredicted RBP12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 SLC9A3R2Q15599 337 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 OR8G1Q15617 311 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 ABCA11PQ4W5N1 156 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 TIMM23BQ5SRD1 257 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 SHEQ5VZ18 495 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 ACOT7LQ6ZUV0 252 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 SEM1Q6ZVN7 128 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 KCNRGQ8N5I3 272 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 KLF14Q8TD94 323 aaPredicted RBP12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 PPP1R1CQ8WVI7 109 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 GALNT14Q96FL9 552 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 C2orf50Q96LR7 162 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 SUCNR1Q9BXA5 334 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 GSX2Q9BZM3 304 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 OR51B6Q9H340 312 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 TNFSF18Q9UNG2 199 aa12.61□□□□□ -0.39
ECHDC1-220ENST00000528402 RIF1Q5UIP0 2472 aaKnown RBP12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 TRBV6-7A0A0A0MS04 114 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 PIGBOS1A0A0B4J2F0 54 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 C13orf42A0A1B0GVH6 325 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 TRDCB7Z8K6 153 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 MSTNO14793 375 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 DEGS1O15121 323 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 KNG1P01042 644 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 IFNA21P01568 189 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 TK1P04183 234 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 GCH1P30793 250 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 CEACAM8P31997 349 aaPredicted RBP12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 ERVK11-1P61568 191 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 HERV-K104P61576 105 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 PSG7Q13046 419 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 BAMBIQ13145 260 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 SPIN3Q5JUX0 258 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 SPATA46Q5T0L3 261 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 MBNL2Q5VZF2 373 aaKnown RBP12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 OR8H3Q8N146 312 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 INO80EQ8NBZ0 244 aaPredicted RBP12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 SEC22AQ96IW7 307 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 ADAT1Q9BUB4 502 aaKnown RBP12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 WDR13Q9H1Z4 485 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 CXXC4Q9H2H0 198 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 METTL8Q9H825 291 aaKnown RBP12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 GLS2Q9UI32 602 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 KIF25Q9UIL4 384 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 PURGQ9UJV8 347 aaKnown RBP12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 SPEF1Q9Y4P9 236 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 ATP23Q9Y6H3 246 aa12.6□□□□□ -0.39
ECHDC1-220ENST00000528402 A0A1W2PR80 420 aa12.59□□□□□ -0.39
ECHDC1-220ENST00000528402 EEF1E1-BLOC1S5C9J1V9 151 aa12.59□□□□□ -0.39
ECHDC1-220ENST00000528402 B3GALNT1O75752 331 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms