RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 KIAA0141Q14154 515 aaPredicted RBP10.88□□□□□ -0.67
CAPN1-208ENST00000527323 SLC16A14Q7RTX9 510 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 LGI3Q8N145 548 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 ZNF799Q96GE5 643 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 Q96M66 194 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 SYT3Q9BQG1 590 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 ZNF700Q9H0M5 742 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 ARV1Q9H2C2 271 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 IGHV3-15A0A0B4J1V0 119 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 IGHV2-5P01817 119 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 PDCD1Q15116 288 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 KCNMB1Q16558 191 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 CDCP2Q5VXM1 449 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 SLC22A25Q6T423 547 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 CPEB2Q7Z5Q1 589 aaKnown RBP10.87□□□□□ -0.67
CAPN1-208ENST00000527323 WDSUB1Q8N9V3 476 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 KDF1Q8NAX2 398 aaPredicted RBP10.87□□□□□ -0.67
CAPN1-208ENST00000527323 OR11L1Q8NGX0 322 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 OR2AE1Q8NHA4 323 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 SCRT1Q9BWW7 348 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 COL25A1Q9BXS0 654 aaPredicted RBP10.87□□□□□ -0.67
CAPN1-208ENST00000527323 BCL2L14Q9BZR8 327 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 TMPRSS5Q9H3S3 457 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 MMP24Q9Y5R2 645 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 CA11O75493 328 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 LSM6P62312 80 aaKnown RBP10.87□□□□□ -0.67
CAPN1-208ENST00000527323 RAB1AP62820 205 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 NKAIN1Q4KMZ8 207 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 LIAT1Q6ZQX7 453 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 SUMF1Q8NBK3 374 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 OR2G3Q8NGZ4 309 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 SUCNR1Q9BXA5 334 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 SLC2A9Q9NRM0 540 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 RARRES3Q9UL19 164 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 RFNGQ9Y644 331 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 V9GYS6 101 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 SPTA1P02549 2419 aa10.87□□□□□ -0.67
CAPN1-208ENST00000527323 A0A0U1RQV5 110 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 TMEM238LA0A1B0GVL6 79 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 ZFAND5O76080 213 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 YIF1AO95070 293 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 NDUFA6P56556 154 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 HIST2H3AQ71DI3 136 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 ZFP62Q8NB50 900 aaPredicted RBP10.86□□□□□ -0.67
CAPN1-208ENST00000527323 ADPRHL1Q8NDY3 354 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 OR2M3Q8NG83 312 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 MR1Q95460 341 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 SPSB2Q99619 263 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 NELFAQ9H3P2 528 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 MYOTQ9UBF9 498 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 ANKRD11Q6UB99 2663 aaPredicted RBP10.86□□□□□ -0.67
CAPN1-208ENST00000527323 FAM24AA6NFZ4 105 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 AQP7P3A6NL99 342 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 ZNF727A8MUV8 499 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 PMELP40967 661 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 NOVA1P51513 510 aaKnown RBP10.86□□□□□ -0.67
CAPN1-208ENST00000527323 SUCLG1P53597 346 aaKnown RBP10.86□□□□□ -0.67
CAPN1-208ENST00000527323 HERV-K104P61576 105 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 IL13RA2Q14627 380 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 PHYHD1Q5SRE7 291 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 DEFB124Q8NES8 71 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 SPTSSAQ969W0 71 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 JSRP1Q96MG2 331 aaPredicted RBP10.86□□□□□ -0.67
CAPN1-208ENST00000527323 TOLLIPQ9H0E2 274 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 NCOA6Q14686 2063 aaPredicted RBP10.86□□□□□ -0.67
CAPN1-208ENST00000527323 DNAJC13O75165 2243 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 CDRT15L2A8MXV6 281 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 NPIPA2E9PIF3 369 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 NPIPA3F8WFD2 350 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 H7C1Q1 480 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 NR2C1P13056 603 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 CTSSP25774 331 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 HIST3H3Q16695 136 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 TMEM95Q3KNT9 176 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 SNAI3Q3KNW1 292 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 SLC25A53Q5H9E4 307 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 LFNGQ8NES3 379 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 MARS2Q96GW9 593 aaKnown RBP10.86□□□□□ -0.67
CAPN1-208ENST00000527323 DEFB126Q9BYW3 111 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 HDGFL3Q9Y3E1 203 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 URGCP-MRPS24S4R325 110 aa10.86□□□□□ -0.67
CAPN1-208ENST00000527323 EML6Q6ZMW3 1958 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 CCDC187A0A096LP49 1063 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 PNLIPP16233 465 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 TAGLN2P37802 199 aaKnown RBP10.85□□□□□ -0.67
CAPN1-208ENST00000527323 PTGDSP41222 190 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 UCP2P55851 309 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 RPS23P62266 143 aaKnown RBP10.85□□□□□ -0.67
CAPN1-208ENST00000527323 CCL20P78556 96 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 ENDOGQ14249 297 aaKnown RBP10.85□□□□□ -0.67
CAPN1-208ENST00000527323 HAGHQ16775 308 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 ZNF674Q2M3X9 581 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 WDR74Q6RFH5 385 aaPredicted RBP10.85□□□□□ -0.67
CAPN1-208ENST00000527323 SGK3Q96BR1 496 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 BORCS8Q96FH0 119 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 GALNT14Q96FL9 552 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 ZNF385AQ96PM9 386 aaKnown RBP10.85□□□□□ -0.67
CAPN1-208ENST00000527323 ZDHHC8Q9ULC8 765 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 G3V3Y1 287 aa10.85□□□□□ -0.67
CAPN1-208ENST00000527323 ETV2O00321 342 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms