RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 C5orf24Q7Z6I8 188 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 OR5L1Q8NGL2 311 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 GLYATL2Q8WU03 294 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 APOBEC3DQ96AK3 386 aaPredicted RBP15.1■□□□□ 0.01
USH1C-205ENST00000527020 LOXL4Q96JB6 756 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 POM121L2Q96KW2 1035 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 RSRP1Q9BUV0 290 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 SUCNR1Q9BXA5 334 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 PLA2G2EQ9NZK7 142 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 LSM5Q9Y4Y9 91 aaKnown RBP15.1■□□□□ 0.01
USH1C-205ENST00000527020 LIPGQ9Y5X9 500 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 ESPL1Q14674 2120 aa15.1■□□□□ 0.01
USH1C-205ENST00000527020 K7EPK0 472 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 NME2P1O60361 137 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 CST4P01036 141 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 MBPP02686 304 aaPredicted RBP15.09■□□□□ 0.01
USH1C-205ENST00000527020 GLI4P10075 376 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 ATF4P18848 351 aaPredicted RBP15.09■□□□□ 0.01
USH1C-205ENST00000527020 NME2P22392 152 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 HAAOP46952 286 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 RAB1AP62820 205 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 CEACAM21Q3KPI0 293 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 IGSF11Q5DX21 431 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 LIAT1Q6ZQX7 453 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 MRPL21Q7Z2W9 205 aaKnown RBP15.09■□□□□ 0.01
USH1C-205ENST00000527020 FAM71E2Q8N5Q1 922 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 EXTL1Q92935 676 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 ARL11Q969Q4 196 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 IL36RNQ9UBH0 155 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 FBXL17Q9UF56 701 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 FRYQ5TBA9 3013 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 FAM90A10PA6NDY2 464 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 FAM90A18PA6NE21 464 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 FAM90A16PA6NEW6 464 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 FAM90A20PA6NIJ5 464 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 FAM90A8PA6NJQ4 464 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 FAM90A7PA6NKC0 464 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 ZNF705EA8MWA4 302 aaPredicted RBP15.09■□□□□ 0.01
USH1C-205ENST00000527020 FAM90A22PA8MWA6 464 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 FAM90A12PA8MX19 464 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 FAM90A5PA8MXJ8 464 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 FAM90A23PA8MXZ1 464 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 H7C1Q1 480 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 LRP3O75074 770 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 FAM90A15PP0C7V4 464 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 FAM90A13PP0C7W8 464 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 FAM90A14PP0C7W9 464 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 FAM90A24PP0C7X0 464 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 ZDHHC23Q8IYP9 409 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 SAXO1Q8IYX7 474 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 SMIM8Q96KF7 97 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 TAF9BQ9HBM6 251 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 MMP26Q9NRE1 261 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 MTCH1Q9NZJ7 389 aa15.09■□□□□ 0.01
USH1C-205ENST00000527020 FAM74A7A6NL05 159 aa15.08■□□□□ 0.01
USH1C-205ENST00000527020 ATG12O94817 140 aa15.08■□□□□ 0.01
USH1C-205ENST00000527020 FGF12P61328 243 aa15.08■□□□□ 0.01
USH1C-205ENST00000527020 FAM74A3Q4VXF1 159 aa15.08■□□□□ 0.01
USH1C-205ENST00000527020 ZNF552Q9H707 407 aaPredicted RBP15.08■□□□□ 0.01
USH1C-205ENST00000527020 TNFSF15O95150 251 aa15.08■□□□□ 0
USH1C-205ENST00000527020 SCGB1D2O95969 90 aa15.08■□□□□ 0
USH1C-205ENST00000527020 PPYP01298 95 aa15.08■□□□□ 0
USH1C-205ENST00000527020 GLP1RP43220 463 aa15.08■□□□□ 0
USH1C-205ENST00000527020 Q6ZS49 121 aa15.08■□□□□ 0
USH1C-205ENST00000527020 ZC4H2Q9NQZ6 224 aa15.08■□□□□ 0
USH1C-205ENST00000527020 PLSCR2Q9NRY7 297 aa15.08■□□□□ 0
USH1C-205ENST00000527020 RCC2Q9P258 522 aaKnown RBP15.08■□□□□ 0
USH1C-205ENST00000527020 PRSS50Q9UI38 385 aa15.08■□□□□ 0
USH1C-205ENST00000527020 NUDT19A8MXV4 375 aa15.07■□□□□ 0
USH1C-205ENST00000527020 ZNF732B4DXR9 585 aa15.07■□□□□ 0
USH1C-205ENST00000527020 NAPSAO96009 420 aa15.07■□□□□ 0
USH1C-205ENST00000527020 ARR3P36575 388 aa15.07■□□□□ 0
USH1C-205ENST00000527020 LPAR6P43657 344 aa15.07■□□□□ 0
USH1C-205ENST00000527020 NOVA1P51513 510 aaKnown RBP15.07■□□□□ 0
USH1C-205ENST00000527020 TMEM33P57088 247 aa15.07■□□□□ 0
USH1C-205ENST00000527020 SMCO1Q147U7 214 aa15.07■□□□□ 0
USH1C-205ENST00000527020 RNPS1Q15287 305 aaKnown RBP15.07■□□□□ 0
USH1C-205ENST00000527020 HES3Q5TGS1 186 aa15.07■□□□□ 0
USH1C-205ENST00000527020 ERGIC1Q969X5 290 aa15.07■□□□□ 0
USH1C-205ENST00000527020 SAT2Q96F10 170 aaPredicted RBP15.07■□□□□ 0
USH1C-205ENST00000527020 BSCL2Q96G97 398 aaPredicted RBP15.07■□□□□ 0
USH1C-205ENST00000527020 TP53RKQ96S44 253 aa15.07■□□□□ 0
USH1C-205ENST00000527020 NKX6-2Q9C056 277 aaPredicted RBP15.07■□□□□ 0
USH1C-205ENST00000527020 KLF13Q9Y2Y9 288 aaPredicted RBP15.07■□□□□ 0
USH1C-205ENST00000527020 FAM186AA6NE01 2351 aa15.07■□□□□ 0
USH1C-205ENST00000527020 GPR31O00270 319 aa15.07■□□□□ 0
USH1C-205ENST00000527020 LILRA1O75019 489 aa15.07■□□□□ 0
USH1C-205ENST00000527020 GAPDHP04406 335 aaKnown RBP15.07■□□□□ 0
USH1C-205ENST00000527020 C10orf91Q5T1B1 145 aa15.07■□□□□ 0
USH1C-205ENST00000527020 ATP1A1-AS1Q5TC04 95 aa15.07■□□□□ 0
USH1C-205ENST00000527020 Q9N2K0 584 aa15.07■□□□□ 0
USH1C-205ENST00000527020 ZDHHC8Q9ULC8 765 aa15.07■□□□□ 0
USH1C-205ENST00000527020 MED12LQ86YW9 2145 aa15.06■□□□□ 0
USH1C-205ENST00000527020 PCNX2A6NKB5 2137 aa15.06■□□□□ 0
USH1C-205ENST00000527020 SYNGR1O43759 233 aa15.06■□□□□ 0
USH1C-205ENST00000527020 DIRAS3O95661 229 aa15.06■□□□□ 0
USH1C-205ENST00000527020 WNT5AP41221 380 aa15.06■□□□□ 0
USH1C-205ENST00000527020 HERV-K104P61576 105 aa15.06■□□□□ 0
USH1C-205ENST00000527020 EIF5AP63241 154 aaKnown RBP15.06■□□□□ 0
USH1C-205ENST00000527020 PJVKQ0ZLH3 352 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms